Job Description P45545 Confidence 99.90% Date Thu Jan 5 12:03:04 GMT 2012 Rank 190 Aligned Residues 320 % Identity 13% Template d1bj4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.65

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																.																											.	.	.	.
Query SS confidence																																.																											.	.	.	.
Query Sequence		Q	F	A	L	V	D	S	I	C	R	H	F	P	G	S	E	F	L	T	G	G	D	L	G	L	T	P	G	L	N	.	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	A	A	A	L	V	Q	G	.	.	.	.	A	G	T	G	A	I	R	A	G	L	A	A	L	L	K	P	G	Q	R
Query Conservation																																.																											.	.	.	.
Alig confidence																																.																											.	.	.	.
Template Conservation
Template Sequence		S	R	A	V	L	E	A	L	G	S	C	L	N	N	K	Y	S	E	G	Y	P	G	Q	R	Y	Y	G	G	T	E	F	I	D	E	L	E	T	L	C	Q	K	R	A	L	Q	A	Y	K	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	E	P	H	G	R
Template Known Secondary structure										T	S	G	G	G	T							T	T			S	S	S																				T	T			T	T	T								S	S													T		T	T
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.												.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		L	L	V	H	D	A	P	V	Y	P	T	T	.	.	.	.	.	.	.	.	.	.	.	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	.	.	.	.	D	L	S	A	L	K	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	L	A	D	V	L
Query Conservation														.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																						.	.
Template Conservation																																																																			.	.
Template Sequence		I	M	G	L	D	L	P	D	G	G	H	L	T	H	G	F	M	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	M	P	Y	K	V	N	P	D	T	G	Y	I	N	Y	D	Q	L	E	E	N	A	R	L	F	H	P	K	L	I	I	A	G	T	.	.	S	C	Y	S	R	N	L	E	Y	A	R	L	R
Template Known Secondary structure							G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T		S	B															S							.	.	S	S			S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	.	.	.	.	K	V	A	R	I	G	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	P	E	G	V	G	A	V	V	G	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	I	N	R	I	R	A
Query Conservation																					.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.									.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.
Template Sequence		K	I	A	D	E	N	G	A	Y	L	M	A	D	M	A	H	I	S	G	L	V	A	A	G	V	V	P	S	P	F	E	.	H	C	H	V	V	T	T	T	T	H	K	T	L	R	G	C	R	A	G	M	I	F	Y	R	K	G	V	K	S	V	D	P	A	T	G	K	E	I	L	Y	N	L	E	S	L	I	N	S
Template Known Secondary structure							T	T								G	G	G						T	T	S	S			G	G	G	.	T		S						S	S	G	G	G				S									S						T	T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.							240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290
Predicted Secondary structure																							.	.	.	.	.	.																																																.	.
Query SS confidence																							.	.	.	.	.	.																																																.	.
Query Sequence		T	L	Y	S	G	G	S	Q	I	Q	G	A	Q	A	L	E	V	L	R	G	L	.	.	.	.	.	.	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A	V	I	A	N	A	Q	S	K	V	L	I	V	E	F	H	.	.	Q	P	I	A
Query Conservation																							.	.	.	.	.	.																																																.	.
Alig confidence																							.	.	.	.	.	.																																.	.	.	.													.	.
Template Conservation																																																												.	.	.	.
Template Sequence		A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	M	T	L	E	F	K	V	Y	Q	H	Q	V	V	A	N	C	R	A	L	S	E	A	L	T	E	L	G	Y	K	I	V	T	G	.	.	.	.	G	S	D	N	H	L	I	L	V	D	L	R	S	K	G	T	D	G
Template Known Secondary structure				T	T	T	T			S																T	T	S																								T	T				T	T	S	.	.	.	.	S		S	S	S						G	G	G	G	T
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.					.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.					.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		A	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	S	G	E	.	.	.	.	E	T	V	L	R	I	L	R	E	S	I	A	S	I
Query Conservation																																																											.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	D	R	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	K	D	F	Q	K	V	A	H	F	I	H	R	G
Template Known Secondary structure											T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S		T	T	S														T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.																		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions