Job Description P45545 Confidence 99.96% Date Thu Jan 5 12:03:04 GMT 2012 Rank 99 Aligned Residues 291 % Identity 13% Template c3pj0D_ PDB info PDB header:lyase Chain: D: PDB Molecule:lmo0305 protein; PDBTitle: crystal structure of a putative l-allo-threonine aldolase (lmo0305)2 from listeria monocytogenes egd-e at 1.80 a resolution Resolution 1.80 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																												.	.																				.	.
Query SS confidence																																												.	.																				.	.
Query Sequence		L	N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	A	A	A	L	V	Q	G	A	G	T	G	A	I	R	A	G	L	A	A	L	L	.	.	K	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	.	.	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	N
Query Conservation																																												.	.																				.	.
Alig confidence																							.																					.	.																				.	.
Template Conservation																							.
Template Sequence		Y	G	N	G	A	V	I	E	D	F	E	T	K	I	A	K	I	L	G	K	Q	.	S	A	V	F	F	P	S	G	T	X	A	Q	Q	I	A	L	R	I	W	A	D	R	K	E	N	R	R	V	A	Y	H	P	L	S	H	L	E	I	H	E	Q	D	G	L	K	E	L	Q	Q	I	T	P	L	L	L	G	T	A
Template Known Secondary structure		T	T	B	S															T		S	.						S																		T								T	T						S	S	T	T														S		T
Template Predicted Secondary structure																							.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		122				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure			.	.	.																															.	.	.																									.	.	.	.	.
Query SS confidence			.	.	.																															.	.	.																									.	.	.	.	.
Query Sequence		D	.	.	.	L	S	A	L	K	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	.	.	.	L	A	D	V	L	A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	.	.	.	.	.	K	V	A	R	I	G	C	E	C	G	A	N	V	S
Query Conservation			.	.	.																															.	.	.																									.	.	.	.	.
Alig confidence			.	.	.																															.	.	.																									.	.	.	.	.
Template Conservation
Template Sequence		N	Q	L	L	T	I	D	D	I	K	S	L	R	E	P	V	S	S	V	L	I	E	L	P	Q	R	E	I	G	G	Q	L	P	A	F	E	E	L	E	K	I	S	E	Y	C	H	E	Q	G	I	S	L	H	L	D	G	A	R	L	W	E	I	T	P	F	Y	Q	K	S	A	E	E	I	C	A	L	F	D	S	V
Template Known Secondary structure		T	S									T		S	S			S						S	S	B	G	G	G	T	S	B																		T								T	T		G	G	G					T								T	T		S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		T	F	S	C	F	K	L	F	G	P	E	G	V	G	A	V	V	G	D	A	D	V	I	N	R	I	R	A	T	L	Y	S	G	G	S	Q	.	.	I	Q	G	A	Q	A	L	E	V	L	R	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V
Query Conservation																																						.	.
Alig confidence								.																														.	.
Template Conservation								.
Template Sequence		Y	V	S	F	Y	G	.	I	G	G	I	A	G	A	I	L	A	G	N	D	D	F	V	Q	E	A	K	I	W	K	R	R	Y	G	G	D	L	I	S	L	Y	P	Y	I	L	S	A	D	Y	Y	F	E	K	R	I	G	K	X	A	E	Y	F	E	A	A	K	G	L	A	E	R	F	N	S	C	S	G	V	K	T
Template Known Secondary structure								.				S	S																					T	T				S																	G	G	G																	T	S	T	T
Template Predicted Secondary structure								.
Template SS confidence
		202	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.				.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		K	S	A	V	I	A	N	A	Q	S	K	V	L	I	V	E	F	H	Q	P	I	A	A	R	.	.	.	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	S
Query Conservation																										.	.	.
Alig confidence			.	.	.																					.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	.	.	.	P	E	V	P	V	S	N	X	F	H	V	Y	F	E	N	S	A	D	E	I	G	A	I	L	T	K	I	Q	D	E	T	G	V	G	I	S	G	Y	L	Q	E	K	S	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	C	A	F	E	V	S	V	G	D	A
Template Known Secondary structure			.	.	.	S	S	S		S	S	S							S	S																						S							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								B		G	G
Template Predicted Secondary structure			.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		282				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.																					.	.	330	.	.	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	E	T	V	L	R	I	L	R	E	S	I	A	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	E	I	P	A	K	N	L	E	L	V	F	R	C	L
Template Known Secondary structure		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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