Job Description P45545 Confidence 99.94% Date Thu Jan 5 12:03:04 GMT 2012 Rank 134 Aligned Residues 313 % Identity 14% Template c3nraA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of an aspartate aminotransferase (yp_354942.1) from2 rhodobacter sphaeroides 2.4.1 at 2.15 a resolution Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		A	L	V	D	S	I	C	R	H	F	P	G	S	E	F	L	T	G	G	D	L	G	L	T	P	G	L	N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	.	.	.	.	A	A	A	L	V	Q	G	A	G	T	G	A	I	R	A	G	L	A	A	L	L	K	P	G	Q	R	L	L	V
Query Conservation																																																	.	.	.	.
Alig confidence																	.	.	.	.	.																												.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		G	A	F	D	L	F	S	A	G	V	Q	S	G	G	V	.	.	.	.	.	Q	A	Y	T	E	Y	R	G	D	L	G	I	R	D	L	L	A	P	R	L	A	A	F	T	G	A	P	V	D	A	R	D	G	L	I	I	T	P	G	T	Q	G	A	L	F	L	A	V	A	A	T	V	A	R	G	D	K	V	A	I
Template Known Secondary structure		T												T			.	.	.	.	.			S			T	T																		T	S				T	T	T	S					S												T	T			T	T
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.											.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.																														.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.																														.	.	.
Query Sequence		H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	D	L	.	.	.	.	.	.	.	.	.	.	S	A	L	K	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	.	.	.	L	A	D	V	L	A	T	L	R	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.																														.	.	.
Alig confidence				.																										.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation				.
Template Sequence		V	Q	.	P	D	Y	F	A	N	R	K	L	V	E	F	F	E	G	E	X	V	P	V	Q	L	D	Y	V	S	A	D	E	T	R	A	G	L	D	L	T	G	L	E	E	A	F	K	A	G	A	R	V	F	L	F	S	N	P	N	N	P	A	G	V	V	Y	S	A	E	E	I	G	Q	I	A	A	L	A	A	R
Template Known Secondary structure				.	S			T									T	T								B				S	S			S	S			B											T	T								S	S		T	T	T
Template Predicted Secondary structure				.
Template SS confidence
		131	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.																					.	.
Query SS confidence																						.	.	.	.	.	.	.	.																					.	.
Query Sequence		A	G	V	P	A	L	T	D	D	N	Y	A	V	M	K	V	A	R	I	G	.	.	.	.	.	.	.	.	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	P	E	G	.	.	V	G	A	V	V	G	D	A	D	V	I	N	R	I	R	A	T	L	Y	S	G	G	S	Q	I	Q	G	A	Q	A
Query Conservation																						.	.	.	.	.	.	.	.																					.	.
Alig confidence																						.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		Y	G	A	T	V	I	A	D	Q	L	Y	S	R	L	R	Y	A	G	A	S	Y	T	H	L	R	A	E	A	A	V	D	A	E	N	V	V	T	I	X	G	P	S	T	E	S	L	S	G	Y	R	L	G	V	A	F	G	S	R	A	I	I	A	R	X	E	K	L	Q	A	I	V	S	L	R	A	A	G	Y	S	Q
Template Known Secondary structure			T								T	T	T	T	S	B		T	T						G	G	G		T	T	S		G	G	G													G	G	G																							T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		L	E	V	L	R	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A	V	I	A	N	A	Q	S	K	V	L	I	V	E	F	H	Q	P	.	.	.	I	A	A	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G	A
Query Conservation																																																										.	.	.
Alig confidence																																				.																						.	.	.
Template Conservation																																				.
Template Sequence		A	V	L	R	G	W	F	D	E	A	P	G	W	X	E	D	R	I	A	R	H	Q	A	I	R	D	E	L	L	H	V	L	R	G	.	E	G	V	F	A	R	T	P	Q	A	G	S	Y	L	F	P	R	L	P	K	L	A	V	A	P	A	E	F	V	K	I	L	R	L	Q	A	G	V	V	V	T	P	G	T	E
Template Known Secondary structure		G	G	G	G	G	T	T				T	T																							.				B					S	B	S	S					B				B	S	S																				G	G	G
Template Predicted Secondary structure																																				.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	.	.	S	G	E	E	T	V	L	R	I	L	R	E	S	I	A
Query Conservation																																					.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	S	P	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	S	V	R	L	N	F	S	Q	D	H	E	A	A	V	A	A	A	R	R	I	V	T	L	V	E
Template Known Secondary structure		T		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	B							S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		371	.	.	.	.																					.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions