Job Description P45545 Confidence 99.94% Date Thu Jan 5 12:03:04 GMT 2012 Rank 143 Aligned Residues 287 % Identity 11% Template c3mc6C_ PDB info PDB header:lyase Chain: C: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of scdpl1 Resolution 3.15 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	A	A	A	.	.	.	L	V	Q	G	A	G	T	G	A	I	R	A	G	L	A	A	L	L	K	.	.	.	.	.	.	.	.	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T
Query Conservation																							.	.	.																				.	.	.	.	.	.	.	.
Alig confidence																							.	.	.																				.	.	.	.	.	.	.	.																		.
Template Conservation																																																																						.
Template Sequence		R	K	M	E	S	E	V	V	S	M	V	L	R	M	F	N	A	P	S	D	T	G	C	G	T	T	T	S	G	G	T	E	S	L	L	L	A	C	L	S	A	K	M	Y	A	L	H	H	R	G	I	T	E	P	E	I	I	A	P	V	T	A	H	A	G	F	D	K	.	A	A	Y	Y	F	G	M	K	L	R	H
Template Known Secondary structure																T	T			T	T	T							S	S																				S			S	S							T	T	S							.					S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.
		118	.	120	.	.	.	.		.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.													180
Predicted Secondary structure									.				.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.				.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	F	N	D	L	S	.	A	L	K	.	.	.	.	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	L	A	D	V	L	A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	K	V	A	.	.	.	.	.	.	.	.	.	.	.	.	R
Query Conservation									.				.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.				.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	L	D	P	T	T	Y	Q	V	D	L	G	K	V	K	K	F	I	N	K	N	T	V	L	L	V	G	S	A	P	N	F	P	H	G	I	A	D	D	I	E	G	L	G	K	I	A	Q	K	Y	K	L	P	L	H	V	D	S	C	L	G	S	F	I	V	S	F	M	E	K	A	G	Y	K	N	L	P	L	L
Template Known Secondary structure				B		T	T	T		S	B		T	T	T	T	G	G	G			S	S								T	T		T	T	T					S		T	T	T	T	T					T	T							T	T	T	T					G	G	G	T	T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.												.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.
Predicted Secondary structure																				.																					.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence																				.																					.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		I	G	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	.	G	P	E	G	V	G	A	V	V	G	D	A	D	V	I	N	R	I	R	A	.	.	.	.	.	.	.	.	.	.	.	T	L	Y	S	G	G	S	Q	I	Q	G	A	Q	A	L	E	V	L	R	G	L	V	F	A	P	V	M	.	H	A
Query Conservation																				.																					.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence																				.																					.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		D	F	R	V	P	G	V	T	S	I	S	C	D	T	H	K	Y	G	F	A	P	K	G	S	S	V	I	M	Y	R	N	S	D	L	R	M	H	Q	Y	Y	V	N	P	A	W	T	G	G	L	Y	G	S	P	T	L	A	G	S	R	P	G	A	I	V	V	G	C	W	A	T	M	V	N	M	G	E	N	G	Y	I
Template Known Secondary structure		S	T	T	S	T	T								T	T	T	T	T				S	S							S	S					T	T	T	S			B	T	T		T	T	S		B			S	S	S		S	S		B
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A	V	I	A	.	N	A	Q	S	K	V	L	I	V	E	F	H	Q	P	I	A	A	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F
Query Conservation																													.
Alig confidence																													.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	C	Q	E	I	V	G	A	A	M	K	F	K	K	Y	I	Q	E	N	I	P	D	L	D	I	M	G	N	P	R	Y	S	V	I	S	F	S	S	K	T	L	N	I	H	E	L	S	D	R	L	S	K	K	G	W	H	F	N	A	L	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																					S		T	T					S				S	S							T	T	T	T										T	T	T		B						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.				.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	.	.	.	S	G	E	E	T	V	L	R	I	L	R	E	S	I	A	S	I
Query Conservation																				.	.	.
Alig confidence		.	.	.	.	.	.	.	.											.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	P	V	A	L	H	M	A	F	T	R	L	S	A	H	V	V	D	E	I	C	D	I	L	R	T	T	V	Q	E	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	S									T	T	T	T		T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions