Job Description P45545 Confidence 99.94% Date Thu Jan 5 12:03:04 GMT 2012 Rank 135 Aligned Residues 286 % Identity 13% Template c3mafB_ PDB info PDB header:lyase Chain: B: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of stspl (asymmetric form) Resolution 2.97 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.									.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.																			.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.																			.	.	.	.	.	.	.	.
Query Sequence		R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	A	A	A	.	.	.	.	.	L	V	Q	G	A	G	T	G	A	I	R	A	G	L	A	A	L	L	.	.	.	.	.	.	.	.	K	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I
Query Conservation																						.	.	.	.	.																			.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.																			.	.	.	.	.	.	.	.																			.
Template Conservation																																																																							.
Template Sequence		K	F	E	A	E	V	V	A	M	T	A	H	M	L	G	G	D	A	A	G	G	T	V	C	G	T	V	T	S	G	G	T	E	S	L	L	L	A	M	K	T	Y	R	D	W	A	R	A	T	K	G	I	T	A	P	E	A	V	V	P	V	S	A	H	A	A	F	D	K	.	A	A	Q	Y	F	G	I	K	L	V
Template Known Secondary structure															T	T	T	T	T	T	T	S								S	S																							S	S							T	T	S		T					.						T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.												180	.
Predicted Secondary structure													.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	D	F	N	D	L	S	A	L	K	.	.	.	.	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	L	A	D	V	L	A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	K	V	A	.	.	.	.	.	.	.	.	.	.	.	R	I
Query Conservation													.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	P	L	D	A	D	Y	R	A	D	V	A	A	M	R	E	A	I	T	P	N	T	V	V	V	A	G	S	A	P	G	Y	P	H	G	V	V	D	P	I	P	E	I	A	A	L	A	A	E	H	G	I	G	C	H	V	D	A	C	L	G	G	F	I	L	P	W	A	E	R	L	G	Y	P	V	P	P	F	D
Template Known Secondary structure					B		T	T	S	S	B											T	T								T	T		T	T	T																	T								T	T	T	T	T	T						T	T	T							S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.												220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	.	G	P	E	G	V	G	A	V	V	G	D	A	D	V	I	N	R	I	R	A	T	.	.	.	.	.	.	.	.	.	.	.	L	Y	S	G	G	S	Q	I	Q	G	A	Q	A	L	E	V	L	R	G	L	V	F	A	P	V	M	H	A	V	Q
Query Conservation																			.																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	L	E	G	V	T	S	V	S	A	D	T	H	K	Y	G	Y	G	A	K	G	T	S	V	I	L	Y	R	R	P	D	L	L	H	Y	Q	Y	F	I	A	A	D	W	P	G	G	L	Y	F	S	P	T	F	A	G	S	R	P	G	A	L	S	A	T	A	W	A	A	M	L	S	L	G	E	E	G	Y	L	D
Template Known Secondary structure		T	T	S	T	T								T	T	T	T	T				S	S							S	S												S	S		T	T						S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A	V	I	A	N	A	Q	S	K	V	L	I	V	E	F	H	Q	P	I	A	A	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	R	R	I	L	Q	A	A	D	R	L	K	A	G	V	R	A	I	P	S	L	K	I	L	G	D	P	L	W	V	I	A	V	A	S	D	E	L	N	I	Y	Q	V	M	E	E	M	A	G	R	G	W	R	L	N	G	L	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			T	S	T	T				S	S			S	S							S	S	S												T	T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.						.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		N	P	Q	S	E	H	C	A	I	R	I	N	P	N	.	.	.	.	.	R	S	G	E	E	T	V	L	R	I	L	R	E	S	I	A	S	I
Query Conservation																.	.	.	.	.
Alig confidence		.	.	.	.	.										.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	P	P	A	F	H	V	A	L	T	L	R	H	T	E	P	G	V	V	D	R	F	L	A	D	L	Q	D	A	V	A	Q	V
Template Known Secondary structure		.	.	.	.	.	T	T								G	G	G	S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions