Job Description P45545 Confidence 99.87% Date Thu Jan 5 12:03:04 GMT 2012 Rank 204 Aligned Residues 291 % Identity 15% Template c3k7yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: aspartate aminotransferase of plasmodium falciparum Resolution 2.80 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																														.	.	.						.	.
Query SS confidence																														.	.	.						.	.
Query Sequence		G	G	D	L	G	L	T	P	G	L	N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	.	.	.	A	Q	A	A	A	.	.	L	V	Q	G	A	G	T	G	A	I	R	A	G	L	A	A	L	L	K	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M
Query Conservation																														.	.	.						.	.
Alig confidence																														.	.	.						.	.
Template Conservation
Template Sequence		Y	K	E	K	P	Y	L	L	G	N	G	T	E	D	F	S	T	L	T	Q	N	L	I	F	G	N	N	S	K	Y	I	E	D	K	K	I	C	T	I	Q	C	I	G	G	T	G	A	I	F	V	L	L	E	F	L	K	M	L	N	V	E	T	L	Y	V	T	N	P	P	Y	I	N	H	V	N	M	I	E	S	R
Template Known Secondary structure									T	T	S	S															S	S		T	T	T	T	T	T																							T	T	T								S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		112	.	.	.	.	.	.	.	120	.								.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.										.	.																							.	.	.
Query SS confidence												.	.	.	.	.	.	.										.	.																							.	.	.
Query Sequence		G	L	T	L	I	T	V	D	F	N	.	.	.	.	.	.	.	D	L	S	A	L	K	Q	V	V	.	.	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	.	.	.	L	A	D	V	L	A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	K	V	A
Query Conservation												.	.	.	.	.	.	.										.	.																							.	.	.
Alig confidence												.	.	.	.	.	.	.										.	.																							.	.	.
Template Conservation
Template Sequence		G	F	N	L	K	Y	I	N	F	F	D	Y	N	L	I	D	I	N	Y	D	L	F	L	N	D	L	R	N	I	P	N	G	S	S	V	I	L	Q	I	S	C	Y	N	P	C	S	V	N	I	E	E	K	Y	F	D	E	I	I	E	I	V	L	H	K	K	H	V	I	I	F	D	I	A	Y	Q	G	F	G	H	T
Template Known Secondary structure		T											T	T	T	T														S		S	S								S	S		T	T	T																												S		T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		180	.											.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.		.	.	.	.	.	.	.	.								210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																			.			.									.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.																			.			.									.	.	.	.	.	.	.
Query Sequence		R	I	.	.	.	.	.	.	.	.	.	.	G	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	.	P	E	.	G	V	G	A	V	V	G	D	.	.	.	.	.	.	.	A	D	V	I	N	R	I	R	A	T	L	Y	S	G	G	S	Q	I	Q	G	A	Q	A	L	E	V	L	R	G	L	V
Query Conservation				.	.	.	.	.	.	.	.	.	.																			.			.									.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.																			.			.									.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	E	E	D	V	L	L	I	R	K	F	E	E	K	N	I	A	F	S	V	C	Q	S	F	S	K	N	M	S	L	Y	G	E	R	A	G	A	L	H	I	V	C	K	N	Q	E	E	K	K	I	V	F	N	N	L	C	F	I	V	R	K	F	Y	S	S	P	V	I	H	T	N	R	I	L	C	Q	L	L	N
Template Known Secondary structure		S	T	T	G	G	G								T	T	T										T	T	T	S			T	T	T	T									S	S																	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		241											.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																										.	.															.
Query SS confidence			.	.	.	.	.	.	.	.	.	.																										.	.															.
Query Sequence		F	.	.	.	.	.	.	.	.	.	.	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	.	.	E	V	K	S	A	V	I	A	N	A	Q	S	K	V	.	L	I	V	E	F	H	Q	P	I	A	A	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V
Query Conservation			.	.	.	.	.	.	.	.	.	.																										.	.															.
Alig confidence			.	.	.	.	.	.	.	.	.	.																										.	.															.								.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		N	Q	N	L	K	L	N	W	I	K	E	L	S	Q	L	S	Q	R	I	T	N	N	R	I	L	F	F	N	K	L	E	T	Y	Q	K	K	Y	N	L	N	Y	D	W	N	V	Y	K	K	Q	R	G	L	F	S	F	V	P	L	L	A	.	.	.	.	K	I	A	E	H	L	K	T	H	H	I	Y	I	I	N	N
Template Known Secondary structure																																			G	G	G	G	T					G	G	G	G	S	S			S	S					G	G	G	G	.	.	.	.	G	G	T	T	T	T	T	T	T	T					T	T
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.				.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	.	.	.	N	R	S	G	E	E	T	V	L	R	I	L	R	E	S	I	A	S	I
Query Conservation																																					.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	N	V	S	G	I	T	K	N	N	V	D	Y	I	A	D	K	I	C	L	S	L	S	Q	I
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G			T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		379																															380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions