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Job DescriptionP45545
Confidence99.97%DateThu Jan 5 12:03:04 GMT 2012
Rank51Aligned Residues317
% Identity14%Templatec3ju7B_
PDB info PDB header:transferaseChain: B: PDB Molecule:putative plp-dependent aminotransferase; PDBTitle: crystal structure of putative plp-dependent aminotransferase2 (np_978343.1) from bacillus cereus atcc 10987 at 2.19 a resolution
Resolution2.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60........ .70.........80...... ...90.........100.........110......
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Query Sequence  DLGLTPGLNQPRVTQRVEQVLADAFHAQAA. ALVQGAGTGAIRAGLAAL. LKPGQRLLVHDAPVYPTTRVIIEQMGLTLI
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Template Sequence  ASHIYTNYG. . PINQRFEQTIXSGFFQNRGAVTTVANATLGLXAAIQLKKRKKGKYALXPSFTFPATPL. AAIWCGLEPY
Template Known Secondary structure  T

SSS
..TSTT
SS
S
TT

SSS
T.TT
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   26...30.... .....40.........50.........60.........70.........80.........90.. .......100..
 
   117..120.. .......130.........140.........150.........160.........170...... ...180.......
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Query Sequence  TVDFND. . . . . LSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATLRAAGVPALTDDNYAVM. . . . KVARIGCECGA
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Template Sequence  FIDISIDDWYXDKTVLWDKIEELKEEVAIVVPYATFGSWXNLEEYEELEK. KGVPVVVDAAPGFGLXNGGXHYGQDFSGX
Template Known Secondary structure 
B
TTT
SB
GGG

B
TTTB



.T

B
TT
TT
TTTTTT
SS
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   103......110.........120.........130.........140.........150.. .......160.........170.........180.
 
   188.190.........200.........210.........220. ........230.........240.........250.....
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Query Sequence  NVSTFSCFKLFGPEGVGAVVGDADVINRIRATLY. . . . . . . . . . . . SGGSQIQGAQALEVLRGLVFAPVMHAVQAGVSER
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Template Sequence  IIYSFHATPFGIGEGGLIYSKNEEDIQRIKRXGNFGFDTNRECTXXGFNCKXSEYAAAIGIATXKKWDDKLKERTRISEW
Template Known Secondary structure 
B





BS
S
TBTTB
TTS
B
S


B



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   182.......190.........200.........210.........220.........230.........240.........250.........260.
 
   256...260.........270......... 280.........290.........300.........310.........320.........330..
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Query Sequence  LLALLNGGAVPEVKSAVIANAQSK. . . VLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFYRLSGTFRQANPQ
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Template Sequence  YKQLLQSNGLXKKGWQLQKTEAVIQQFXPILCPEEVRNKQVIEDLKKQKIEARLYFSPSC. HQQVLFRNYKSTDLTRTNK
Template Known Secondary structure  TTTTTTT
B



S
B

SS

TTS
TTB

B
TTSS
G.GGSGGGTTS
BS

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   263......270.........280.........290.........300.........310.........320.. .......330.........340.
 
   333......340.........350.........360
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Query Sequence  SEHCAIRINPNRSGEETVLRILRESIAS
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Template Sequence  IAKRIVSLPLWEGXTKEIVEQIVICLGQ
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TT


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   342.......350.........360.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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