Job Description P45545 Confidence 99.97% Date Thu Jan 5 12:03:04 GMT 2012 Rank 68 Aligned Residues 333 % Identity 12% Template c3jtxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (np_283882.1) from neisseria2 meningitidis z2491 at 1.91 a resolution Resolution 1.91 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure															.																																																				.	.	.	.	.
Query SS confidence															.																																																				.	.	.	.	.
Query Sequence		K	T	F	P	L	Q	S	L	T	I	I	E	A	.	Q	Q	K	Q	F	A	L	V	D	S	I	C	R	H	F	P	G	S	E	F	L	T	G	G	D	L	G	L	T	P	G	L	N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	.	.	.	.	.	Q	A	A	A	L	V	Q	G	A	G
Query Conservation															.																																																				.	.	.	.	.
Alig confidence															.																				.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.
Template Sequence		E	G	X	E	A	V	P	L	H	I	G	E	P	K	H	P	T	P	K	V	I	T	D	A	L	T	A	S	L	H	E	L	E	.	.	.	.	.	.	.	K	Y	P	L	T	A	G	L	P	E	L	R	Q	A	C	A	N	W	L	K	R	R	Y	D	G	L	T	V	D	A	D	N	E	I	L	P	V	L	G	S
Template Known Secondary structure		T	T						T	T			S			S													T	G	G	G	G	G	.	.	.	.	.	.	.	S				T	T																	T	T	T					T	T	T	S					S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.																																					.	.	.	.	.
Query SS confidence															.	.	.																																					.	.	.	.	.
Query Sequence		T	G	A	I	R	A	G	L	A	A	L	L	K	.	.	.	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	D	L	S	.	.	.	.	.	A	L	K	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P
Query Conservation															.	.	.																																					.	.	.	.	.
Alig confidence															.	.	.								.																													.	.	.	.	.
Template Conservation																									.
Template Sequence		R	E	A	L	F	S	F	V	Q	T	V	L	N	P	V	G	I	K	P	A	I	V	S	.	P	N	P	F	Y	Q	I	Y	E	G	A	T	L	L	G	G	G	E	I	H	F	A	N	C	P	A	P	S	F	N	P	D	W	R	S	I	S	E	E	V	W	K	R	T	K	L	V	F	V	C	S	P	N	N	P	S
Template Known Secondary structure																									.			S												T	T										T	T	T					G	G	G	S						T	T								S	S		T	T	T
Template Predicted Secondary structure																									.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		148	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.													.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure							.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence							.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		Q	D	S	Y	V	.	.	.	L	A	D	V	L	A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	K	V	A	R	I	G	.	.	.	.	.	.	.	.	.	.	.	.	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	P	E	.	G	V	G	A	V	V	G	D	A	D
Query Conservation							.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence							.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		G	S	V	L	D	L	D	G	W	K	E	V	F	D	L	Q	D	K	Y	G	F	I	I	A	S	D	E	C	Y	S	E	I	Y	F	D	G	N	K	P	L	G	C	L	Q	A	A	A	Q	L	G	R	S	R	Q	K	L	L	X	F	T	S	L	S	R	S	N	V	P	G	L	R	S	G	F	V	A	G	D	A	E
Template Known Secondary structure																													T	T	T	T			S	T	T													T	T				T	T											S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	R	I	R	A	T	L	Y	S	G	G	S	Q	I	Q	G	A	Q	A	L	E	V	L	R	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A	V	I	A	N	A	Q	S	K	V	L	I	V	E	F	H	Q	P	I	A	A
Query Conservation
Alig confidence																																																											.	.	.
Template Conservation																																																											.	.	.
Template Sequence		L	L	K	N	F	L	L	Y	R	T	Y	H	G	S	A	X	S	I	P	V	Q	R	A	S	I	A	A	W	D	D	E	Q	H	V	I	D	N	R	R	L	Y	Q	E	K	F	E	R	V	I	P	I	L	Q	Q	V	F	D	.	.	.	V	K	L	P	D	A	S	F	Y	I	W	L	K	V	P	D	G	D	D	L
Template Known Secondary structure														T																																								T	T	T	S		.	.	.					S	S	S	S							T	T	S
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		292	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																																																.	.
Query SS confidence								.																																																.	.
Query Sequence		R	V	L	E	E	A	.	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	.	.	S	G	E	E	T	V	L	R	I	L	R	E	S	I	A
Query Conservation								.																																																.	.
Alig confidence								.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	A	R	N	L	W	Q	K	A	A	I	Q	V	L	P	G	R	F	L	A	R	D	T	E	Q	G	N	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	Y	V	R	I	A	L	V	A	D	V	A	T	C	V	K	A	A	E	D	I	V	S	L	Y	R
Template Known Secondary structure																		G	G	G	G	S			B	T	T	B		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.															.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions