Job Description P45545 Confidence 99.93% Date Thu Jan 5 12:03:04 GMT 2012 Rank 164 Aligned Residues 340 % Identity 12% Template c3hl2D_ PDB info PDB header:transferase Chain: D: PDB Molecule:o-phosphoseryl-trna(sec) selenium transferase; PDBTitle: the crystal structure of the human sepsecs-trnasec complex Resolution 2.81 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90
Predicted Secondary structure																																									.	.	.	.												.	.																			.	.	.
Query SS confidence																																									.	.	.	.												.	.																			.	.	.
Query Sequence		A	L	V	D	S	I	C	R	H	F	P	G	S	E	F	L	T	G	G	D	L	G	L	T	P	G	L	N	Q	P	R	V	T	Q	R	V	E	Q	V	.	.	.	.	L	A	D	A	F	H	A	Q	A	A	A	.	.	L	V	Q	G	A	G	T	G	A	I	R	A	G	L	A	A	L	L	.	.	.	K	P	G
Query Conservation																																									.	.	.	.												.	.																			.	.	.
Alig confidence																																									.	.	.	.												.	.																			.	.	.
Template Conservation
Template Sequence		A	L	V	A	R	R	H	Y	R	F	I	H	G	I	G	R	S	G	D	I	S	A	V	Q	P	K	A	A	G	S	S	L	L	N	K	I	T	N	S	L	V	L	D	I	I	K	L	A	G	V	H	T	V	A	N	C	F	V	V	P	M	A	T	G	M	S	L	T	L	C	F	L	T	L	R	H	K	R	P	K
Template Known Secondary structure								T	T	T			S		B	S	B	T	T	B	T	T	S			T	T	B																						T		T	T								S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.											.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.											.	.	.
Query Sequence		Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	.	.	.	.	.	.	.	.	N	D	L	S	A	L	K	Q	V	V	.	.	.	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	L	A	D	V	L	A	T
Query Conservation																																.	.	.	.	.	.	.	.											.	.	.
Alig confidence																																.	.	.	.	.	.	.	.											.	.	.
Template Conservation
Template Sequence		A	K	Y	I	I	W	P	R	I	D	Q	K	S	C	F	K	S	M	I	T	A	G	F	E	P	V	V	I	E	N	V	L	E	G	D	E	L	R	T	D	L	K	A	V	E	A	K	V	Q	E	L	G	P	D	C	I	L	C	I	H	S	T	T	S	C	F	A	P	R	V	P	D	R	L	E	E	L	A	V	I
Template Known Secondary structure																						T	T												T	T																		G	G	G								S	S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.							.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																								.	.	.	.	.	.																.														.
Query SS confidence																								.	.	.	.	.	.																.														.
Query Sequence		L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	K	V	A	R	I	.	.	.	.	.	.	G	C	E	C	G	A	N	V	S	T	F	S	C	F	K	.	L	F	G	P	E	G	V	G	A	V	V	G	D	.	A	D	V	I	N	R	I	R	A	T	L	Y	S	G	G	S	Q	I	Q	G	A	Q
Query Conservation																								.	.	.	.	.	.																.														.
Alig confidence																								.	.	.	.	.	.																.														.
Template Conservation
Template Sequence		C	A	N	Y	D	I	P	H	I	V	N	N	A	Y	G	V	Q	S	S	K	C	M	H	L	I	Q	Q	G	A	R	V	G	R	I	D	A	F	V	Q	S	L	D	K	N	F	M	V	P	V	G	G	A	I	I	A	G	F	N	D	S	F	I	Q	E	I	S	K	M	Y	P	G	R	A	S	A	S	P	S	L	D
Template Known Secondary structure						T								T	T		T	T															S													S				S	S							S											T	S		S		B		S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		232	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.							.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure							.	.																																																		.	.	.	.	.	.
Query SS confidence							.	.																																																		.	.	.	.	.	.
Query Sequence		A	L	E	V	L	.	.	R	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A	V	I	A	N	A	Q	S	K	V	L	I	V	E	F	.	.	.	.	.	.	H	Q	P	I	A	A	R	V	L	E	E	A	Q	K	R	G	A	L
Query Conservation							.	.																																																		.	.	.	.	.	.
Alig confidence							.	.																																																		.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	I	T	L	L	S	L	G	S	N	G	Y	K	K	L	L	K	E	R	K	E	M	F	S	Y	L	S	N	Q	I	K	K	L	S	E	A	Y	N	E	R	L	L	H	T	P	H	N	P	I	S	L	A	M	T	L	K	T	L	D	E	H	R	D	K	A	V	T	Q	L	G	S	M	L	F	T	R	Q	V	S
Template Known Secondary structure																																							T	T			B				T	T		S	S							T	T			T	T	T	S													T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	S	G	E	E	T	V	L	R	I	L	R	E	S	I	A	S	I
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		G	A	R	V	V	P	L	G	S	M	Q	T	V	S	G	Y	T	F	R	G	F	M	S	H	T	N	N	Y	P	.	.	C	A	Y	L	N	A	A	S	A	I	G	M	K	M	Q	D	V	D	L	F	I	K	R	L	D	R	C
Template Known Secondary structure		S						S	S						T	T					S	T	T	T	T	S	S			S	.	.	S									T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430			.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions