Job Description P45545 Confidence 99.96% Date Thu Jan 5 12:03:04 GMT 2012 Rank 101 Aligned Residues 331 % Identity 15% Template c3h7fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase 1; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		K	T	F	P	L	Q	S	L	T	I	I	E	A	Q	Q	K	Q	F	A	L	V	D	S	I	C	R	H	F	P	G	S	E	F	L	T	G	G	D	L	G	L	T	P	G	L	N	Q	.	.	.	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	A	A	A	L	V	Q	G	A	G	T	G	A
Query Conservation																																																	.	.	.
Alig confidence														.	.	.	.													.	.																		.	.	.
Template Conservation														.	.	.	.													.	.
Template Sequence		D	T	L	E	M	I	A	S	E	N	F	V	.	.	.	.	P	R	A	V	L	Q	A	Q	G	S	V	L	.	.	T	N	K	Y	A	E	G	L	P	G	R	R	Y	Y	G	G	C	E	H	V	D	V	V	E	N	L	A	R	D	R	A	K	A	L	F	G	A	E	F	A	N	V	Q	P	H	S	G	A	Q	A
Template Known Secondary structure			S					T	T					.	.	.	.									T	S	G	G	.	.	G	G							T	T			S	S	S																					T		S							S	S
Template Predicted Secondary structure														.	.	.	.													.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.																				.	.	.	.	.	.
Query SS confidence																										.	.	.	.																				.	.	.	.	.	.
Query Sequence		I	R	A	G	L	A	A	L	L	K	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	.	.	.	.	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	.	.	.	.	.	.	D	L	S	A	L	K	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q
Query Conservation																										.	.	.	.																				.	.	.	.	.	.
Alig confidence																										.	.	.	.																				.	.	.	.	.	.																					.	.
Template Conservation																																																																											.	.
Template Sequence		N	A	A	V	L	H	A	L	M	S	P	G	E	R	L	L	G	L	D	L	A	N	G	G	H	L	T	H	G	M	R	L	N	F	S	G	K	L	Y	E	N	G	F	Y	G	V	D	P	A	T	H	L	I	D	M	D	A	V	R	A	T	A	L	E	F	R	P	K	V	I	I	A	G	.	.	W	S	A	Y	P
Template Known Secondary structure												T	T								G	G	G	T			G	G	G	T		T	T	S					S	S									T	T	T		S																S						.	.		S	S
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		D	S	Y	V	L	A	D	V	L	A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	.	.	.	.	K	V	A	R	I	G	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	P	E	G	V	G	A	V	V	G	D	A	D	V	I	N	R	I	R	A	T	L	Y	S	G	G
Query Conservation																														.	.	.	.
Alig confidence																														.	.	.	.										.																	.
Template Conservation																																											.																	.
Template Sequence		R	V	L	D	F	A	A	F	R	S	I	A	D	E	V	G	A	K	L	L	V	D	M	A	H	F	A	G	L	V	A	A	G	L	H	P	S	P	V	P	H	.	A	D	V	V	S	T	T	V	H	T	L	G	G	G	R	S	.	G	L	I	V	G	K	Q	Q	Y	A	K	A	I	N	S	A	V	F	P	G	Q
Template Known Secondary structure		S															T								T	T	T						T	T	S	S			S	T	T	T	.		S													S		.							G	G	G									T	T	T	T
Template Predicted Secondary structure																																											.																	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		225	.	.	.	.							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.																																													.													.	.
Query SS confidence							.	.	.	.	.	.																																													.													.	.
Query Sequence		S	Q	I	Q	G	.	.	.	.	.	.	A	Q	A	L	E	V	L	R	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A	V	I	.	A	N	A	Q	S	K	V	L	I	V	E	F	.	.	H	Q	P	I	A	A	R	V	L	E
Query Conservation							.	.	.	.	.	.																																													.													.	.
Alig confidence							.	.	.	.	.	.																																													.													.	.
Template Conservation
Template Sequence		Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	I	A	A	T	P	E	F	A	D	R	Q	R	R	T	L	S	G	A	R	I	I	A	D	R	L	M	A	P	D	V	A	K	A	G	V	S	V	V	S	G	G	T	D	V	H	L	V	L	V	D	L	R	D	S	P	L	D	G	Q	A	A	E	D
Template Known Secondary structure			S	S																	T	S																						S	S						T	T				G	G	G	S		S	S	S							T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.									.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.
Query Sequence		E	A	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	S	G	E	.	.	.	.	.	.	.	.	E	T	V	L	R	I	L	R	E	S	I
Query Conservation																																																						.	.	.	.	.	.	.	.
Alig confidence													.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation													.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	H	E	V	G	I	T	V	N	R	.	.	N	A	V	P	N	D	P	R	P	P	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	G	L	R	I	G	T	P	A	L	A	T	R	G	F	G	D	T	E	F	T	E	V	A	D	I	I	A	T	A	L
Template Known Secondary structure						T	T						.	.				T	T		S	S		T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S													T
Template Predicted Secondary structure													.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.															.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions