Job Description P45545 Confidence 99.96% Date Thu Jan 5 12:03:04 GMT 2012 Rank 86 Aligned Residues 291 % Identity 15% Template c3h14A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative aminotransferase from silicibacter2 pomeroyi Resolution 1.90 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	.	.	.	A	Q	A	A	A	L	V	Q	G	A	G	T	G	A	I	R	A	G	L	A	A	L	L	K	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	D	L
Query Conservation																				.	.	.
Alig confidence																				.	.	.																																		.
Template Conservation																																																								.
Template Sequence		G	L	P	A	L	R	Q	R	I	A	R	L	Y	G	E	W	Y	G	V	D	L	D	P	G	R	V	V	I	T	P	G	S	S	G	G	F	L	L	A	F	T	A	L	F	D	S	G	D	R	V	G	I	G	A	.	P	G	Y	P	S	Y	R	Q	I	L	R	A	L	G	L	V	P	V	D	L	P	T	A	P	E
Template Known Secondary structure																								G	G	G					S	S															T	T								.	S												T	T										G	G
Template Predicted Secondary structure																																																								.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		124	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure						.	.	.																													.	.	.																				.	.	.	.
Query SS confidence						.	.	.																													.	.	.																				.	.	.	.
Query Sequence		S	A	L	K	.	.	.	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	L	A	D	.	.	.	V	L	A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	.	.	.	.	V	M	K	V	A	R	I	G	C	E	C	G	A	N	V	S	T	F	S
Query Conservation						.	.	.																													.	.	.																				.	.	.	.
Alig confidence						.	.	.																													.	.	.																				.	.	.	.
Template Conservation
Template Sequence		N	R	L	Q	P	V	P	A	D	F	A	G	L	D	L	A	G	L	X	V	A	S	P	A	N	P	T	G	T	X	L	D	H	A	A	X	G	A	L	I	E	A	A	Q	A	Q	G	A	S	F	I	S	D	E	I	Y	H	G	I	E	Y	E	A	K	A	V	T	A	L	E	L	T	D	E	C	Y	V	I	N	S
Template Known Secondary structure		G	T	T	S							T	T	S			S						S	S		T	T	T																			T	T								T	T	T	T		B	S	S	S					G	G	G	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		C	F	K	L	F	G	P	E	G	.	.	V	G	A	V	V	G	D	A	D	V	I	N	R	I	R	A	T	L	Y	S	G	G	S	Q	I	Q	G	A	Q	A	L	E	V	L	R	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		F	S	K	Y	F	S	X	T	G	W	R	V	G	W	X	V	V	P	E	D	Q	V	R	V	V	E	R	I	A	Q	N	X	F	I	C	A	P	H	A	S	Q	V	A	A	L	A	A	L	D	C	D	A	E	L	Q	A	N	L	D	V	Y	K	A	N	R	K	L	X	L	E	R	L	P	K	A	G	F	T	R	I
Template Known Secondary structure		S	S	S	T	T			T	T	S									G	G	G											T	T															T	T																											T				B
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.												.
Query SS confidence																	.	.												.
Query Sequence		V	I	A	N	A	Q	S	K	V	L	I	V	E	F	H	.	.	Q	P	I	A	A	R	V	L	E	E	A	.	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	S	G	E	E
Query Conservation																	.	.												.
Alig confidence							.										.	.												.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation							.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		A	P	P	D	G	.	A	F	Y	V	Y	A	D	V	S	D	L	T	D	D	S	R	A	F	A	A	E	I	L	E	K	A	G	V	A	V	T	P	G	L	D	F	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	G	A	G	T	L	R	F	S	Y	A	.	.	R	A	T
Template Known Secondary structure						B	.	T	T							T	T	T		S																				G	G	G	T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	G	G	G								.	.	S
Template Predicted Secondary structure							.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		308	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350																				.	.	.	.	.	.	.	.	.	360	.	.			.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	L	R	I	L	R	E	S	I	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	I	E	E	G	L	D	R	L	E	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions