Job Description P45545 Confidence 99.97% Date Thu Jan 5 12:03:04 GMT 2012 Rank 63 Aligned Residues 334 % Identity 17% Template c3ez1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase mocr family; PDBTitle: crystal structure of putative aminotransferase (mocr family)2 (yp_604413.1) from deinococcus geothermalis dsm 11300 at 2.60 a3 resolution Resolution 2.60 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.
Predicted Secondary structure																																																																						.									.	.	.
Query SS confidence																																																																						.									.	.	.
Query Sequence		S	L	T	I	I	E	A	Q	Q	K	Q	F	A	L	V	D	S	I	C	R	H	F	P	G	S	E	F	L	T	G	G	D	L	G	L	T	P	G	L	N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	A	A	A	L	V	Q	G	A	G	.	T	G	A	I	R	A	G	L	.	.	.
Query Conservation																																																																						.									.	.	.
Alig confidence																									.																																													.									.	.	.
Template Conservation																									.
Template Sequence		N	X	Q	R	G	Q	P	A	D	A	D	F	D	L	S	N	G	L	L	T	V	L	G	.	A	E	D	V	R	X	D	G	L	D	L	R	N	Y	P	G	G	V	A	G	L	P	S	A	R	A	L	F	A	G	Y	L	D	V	K	A	E	N	V	L	V	W	N	N	S	S	L	E	L	Q	G	L	V	L	T	F
Template Known Secondary structure			S												T	T	G	G	G	G	G	S			.	G	G	G				T	T			T	T	S	S		S		T	T													T	T	S		G	G	G					S	S
Template Predicted Secondary structure																									.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
												84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.		.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																							.	.	.	.													.									.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																							.	.	.	.													.									.
Query Sequence		.	.	.	.	.	.	.	.	.	.	A	A	L	L	K	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	.	.	.	.	D	L	S	A	L	K	Q	V	V	D	E	Q	.	Q	P	D	A	A	L	V	Q	.	H	T	R	Q	Q	P
Query Conservation		.	.	.	.	.	.	.	.	.	.																																							.	.	.	.													.									.
Alig confidence		.	.	.	.	.	.	.	.	.	.													.																										.	.	.	.													.									.
Template Conservation																								.
Template Sequence		A	L	L	H	G	V	R	G	S	T	G	P	W	L	S	Q	T	P	K	X	I	V	.	T	V	P	G	Y	D	R	H	F	L	L	L	Q	T	L	G	F	E	L	L	T	V	D	X	Q	S	D	G	P	D	V	D	A	V	E	R	L	A	G	T	D	P	S	V	K	G	I	L	F	V	P	T	Y	S	N	P	G
Template Known Secondary structure					T			T	T		S	S		G	G	G	G							.			S													T										T	T													S		T	T								S	S	S		T	T	T
Template Predicted Secondary structure																								.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.															.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence														.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		Q	D	S	Y	V	L	A	D	V	L	A	T	.	.	.	.	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	K	V	A	R	I	G	C	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	P	E	.	G	V	G	A	V	V	G
Query Conservation														.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence														.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		G	E	T	I	S	L	E	K	A	R	R	L	A	G	L	Q	A	A	A	P	D	F	T	I	F	A	D	D	A	Y	R	V	H	H	L	V	E	E	D	R	A	E	P	V	N	F	V	V	L	A	R	D	A	G	Y	P	D	R	A	F	V	F	A	S	T	S	K	I	T	F	A	G	A	G	L	G	F	V	A	S
Template Known Secondary structure															T				S	S	T	T								T	T	S	S		B			S	S	S															T		T	T	S							S	T	T	T	S		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240									.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.
Query Sequence		D	A	D	V	I	N	R	I	R	A	T	L	Y	S	G	G	S	Q	I	Q	G	A	Q	A	L	E	V	L	R	G	L	V	.	.	.	.	.	.	.	.	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A	V	I	A	N	A	Q	S	K	V
Query Conservation																																		.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	D	N	I	R	W	L	S	K	Y	L	G	A	Q	S	I	G	P	N	K	V	E	Q	A	R	H	V	K	F	L	T	E	Y	P	G	G	L	E	G	L	X	R	D	H	A	A	I	I	A	P	K	F	R	A	V	D	E	V	L	R	A	E	L	G	E	G	G	E	Y	A	T	W	T	L	P	K	G	G	Y
Template Known Secondary structure																S		S																	S	T	T																													T	T	T	T	S	S							S	B	S	S
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
			281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.				.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure		.																																																																	.	.	.
Query SS confidence		.																																																																	.	.	.
Query Sequence		.	L	I	V	E	F	H	Q	P	I	A	A	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	.	.	.	S	G	E	E	T	V	L	R	I	L	R	E
Query Conservation		.																																																																	.	.	.
Alig confidence		.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	S	L	D	T	A	E	P	V	A	D	R	V	V	K	L	A	E	A	A	G	V	S	L	T	P	A	G	A	T	Y	P	A	G	Q	D	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	N	L	R	L	A	P	T	R	P	P	V	E	E	V	R	T	A	X	Q	V	V	A	A
Template Known Secondary structure								S	S	S												T	T						T	T	T	T	S	S	T	T			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								S	S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.																	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		357	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	I	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		410	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions