Job Description P45545 Confidence 99.96% Date Thu Jan 5 12:03:04 GMT 2012 Rank 96 Aligned Residues 305 % Identity 16% Template c3d6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative aminotransferase; PDBTitle: the crystal structure of a putative aminotransferase from2 corynebacterium diphtheriae Resolution 2.00 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.															.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	G	G	D	L	G	L	T	P	G	L	N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	A	A	A	L	V	Q	G	A	G	.	T	G	A	I	R	A	G	L	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	K	P	G	Q	R	L	L	V	H	D	A	P
Query Conservation																																											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																																																														.
Template Sequence		F	R	T	K	D	G	V	D	C	R	N	Y	G	G	L	L	G	I	A	D	I	R	E	L	W	A	E	A	L	G	L	P	A	D	L	V	V	A	Q	D	G	S	S	L	N	I	X	F	D	L	I	S	W	S	Y	T	W	G	N	N	D	S	S	R	P	W	S	A	E	E	K	V	K	W	L	C	.	P	V	P
Template Known Secondary structure			B		T	T			B	T	T	S	S			S	S														T			G	G	G					S	S																			T	T		S	S		G	G	G	S	S							.			S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170
Predicted Secondary structure																								.	.	.	.																					.												.	.	.												.
Query SS confidence																								.	.	.	.																					.												.	.	.												.
Query Sequence		V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	.	.	.	.	D	L	S	A	L	K	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	.	H	T	R	Q	Q	P	Q	D	S	Y	V	.	.	.	L	A	D	V	L	A	T	L	R	A	A	.	G	V	P	A	L	T	D
Query Conservation																								.	.	.	.																					.												.	.	.												.
Alig confidence																								.	.	.	.																					.												.	.	.												.
Template Conservation
Template Sequence		G	Y	D	R	H	F	T	I	T	E	H	F	G	F	E	X	I	N	V	P	X	T	D	E	G	P	D	X	G	V	V	R	E	L	V	K	D	P	Q	V	K	G	X	W	T	V	P	V	F	G	N	P	T	G	V	T	F	S	E	Q	T	C	R	E	L	A	E	X	S	T	A	A	P	D	F	R	I	V	W	D
Template Known Secondary structure													T	T										T	T											T	T	S	T	T									S	S		T	T	T																		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.														.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		D	N	Y	A	V	M	K	V	A	R	I	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	P	E	.	G	V	G	A	V	V	G	D	A	D	V	I	N	R	I	R	A	T	L	Y	S	G	G	S	Q	I	Q	G	A	Q	A	L	E	V	L
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		N	A	Y	A	L	H	T	L	S	D	E	F	P	I	V	H	N	V	I	E	F	A	Q	A	A	G	N	P	N	R	F	W	F	X	S	S	T	S	K	I	T	H	A	G	S	G	V	S	F	F	A	S	S	K	E	N	I	E	W	Y	A	S	H	A	N	V	R	G	I	G	P	N	K	L	N	Q	L	A	H	A
Template Known Secondary structure			T	T	T	T		B	S	S	S																T		T	T								S	T	T	T	S		T	T	S	S																							S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270							.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.											.
Query SS confidence																																				.	.	.	.	.	.											.
Query Sequence		R	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	.	.	.	.	.	.	A	V	I	A	N	A	Q	S	K	V	.	L	I	V	E	F	H	Q	P	I	A	A	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G	A
Query Conservation																																				.	.	.	.	.	.											.
Alig confidence																																				.	.	.	.	.	.											.
Template Conservation
Template Sequence		Q	F	F	G	D	V	A	G	L	K	A	H	X	L	K	H	A	A	S	L	A	P	K	F	E	R	V	L	E	I	L	D	S	R	L	S	E	Y	G	V	A	K	W	T	S	P	T	G	G	Y	F	I	S	V	D	V	V	P	G	T	A	S	R	V	V	E	L	A	K	E	A	G	I	A	L	T	G	A	G	S
Template Known Secondary structure						S																															G	G	G		S							S	B	S	S							S	T	T												T	T						T	T	T
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	S	G	E	E	T	V	L	R	I	L	R	E
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	P	L	H	N	D	P	N	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	R	L	A	P	S	L	P	P	V	A	E	L	E	V	A	X	D	G
Template Known Secondary structure		T	S	G	G	G			T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.																	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions