Job Description P45545 Confidence 100.00% Date Thu Jan 5 12:03:04 GMT 2012 Rank 40 Aligned Residues 340 % Identity 14% Template c2ogeC_ PDB info PDB header:transferase Chain: C: PDB Molecule:transaminase; PDBTitle: x-ray structure of s. venezuelae desv in its internal2 aldimine form Resolution 2.05 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		S	L	T	I	I	E	A	Q	Q	K	Q	F	A	L	V	D	S	I	C	R	H	F	P	G	S	E	F	L	T	G	G	D	L	G	L	T	P	G	L	N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	A	A	A	L	V	Q	G	A	G	T	G	A	I	R	A	G	L	A	A	L	.
Query Conservation																																																																																	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.																		.																				.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		F	L	D	L	K	A	A	Y	E	E	L	R	A	E	T	D	A	A	I	A	R	V	L	D	S	G	R	Y	L	L	G	.	.	.	.	.	.	.	.	.	.	.	P	E	L	E	G	F	E	A	E	F	A	A	Y	C	E	T	D	.	H	A	V	G	V	N	S	G	M	D	A	L	Q	L	A	L	R	G	L	G
Template Known Secondary structure		S										T															T			S	S	S	.	.	.	.	.	.	.	.	.	.	.														T	T	S	S	.						S													T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.												.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		L	K	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	D	L	S	A	L	K	.	.	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	L	A	D	V	L	A	T	L	R	A	A	G
Query Conservation																																											.	.
Alig confidence																					.																						.	.
Template Conservation																					.
Template Sequence		I	G	P	G	D	E	V	I	V	P	S	H	T	Y	I	A	S	W	L	.	A	V	S	A	T	G	A	T	P	V	P	V	E	P	H	E	D	H	P	T	L	D	P	L	L	V	E	K	A	I	T	P	R	T	R	A	L	L	P	V	H	L	Y	G	H	P	A	D	M	D	A	L	R	E	L	A	D	R	H	G
Template Known Secondary structure				T	T							S	S	S							.				T	T	T								B		S	S	S	S	S	B						G	G	G			S	S							B		G	G	G															T	T
Template Predicted Secondary structure																					.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.														.	.	.	.
Predicted Secondary structure																				.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	P	A	L	T	D	D	N	Y	A	V	M	K	V	A	R	I	G	.	.	.	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	P	E	G	V	G	A	V	V	G	D	A	D	V	I	N	R	I	R	A	T	L	Y	S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	I	Q
Query Conservation																				.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	H	I	V	E	D	A	A	Q	A	H	G	A	R	Y	R	G	R	R	I	G	A	G	S	S	V	A	A	F	S	F	Y	P	G	N	L	G	C	F	G	D	G	G	A	V	V	T	G	D	P	E	L	A	E	R	L	R	M	L	R	N	Y	G	S	R	Q	K	Y	S	H	E	T	K	G	T	N	S	R	L	D
Template Known Secondary structure									T	T		T	T				T	T			T	T		T	T															S	S								S												T	B	T	T		S	B	T	T	B		S	S				B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	Q	A	L	E	V	L	R	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A	V	I	A	N	A	Q	S	K	V	L	I	V	E	F	H	Q	P	I	A	A	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		E	M	Q	A	A	V	L	R	I	R	L	A	H	L	D	S	W	N	G	R	R	S	A	L	A	A	E	Y	L	S	G	L	A	G	L	P	G	I	G	L	P	V	T	A	P	D	T	D	P	V	W	H	L	.	F	T	V	R	T	E	R	R	D	E	L	R	S	H	L	D	A	R	G	I	D	T	L	T	H	Y
Template Known Secondary structure														T																			T	T	T		T	T	S	B						T	T						S		.						T	T											T	T	B			B		S
Template Predicted Secondary structure																																																							.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	E	S	K	Y	E	I	P	P	.	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	S	G	E	E	T	V	L	R	I	L	R	E	S	I	A	S	I
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		P	V	P	V	H	L	S	P	A	Y	A	G	E	A	P	P	E	G	S	L	P	R	A	E	S	F	A	R	Q	V	L	S	L	P	I	G	P	H	L	E	R	P	Q	A	L	R	V	I	D	A	V	R	E	W
Template Known Secondary structure		S	S		G	G	G	S	G	G	G	T	T	T	S			T	T	S																	S	T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions