Job Description P45545 Confidence 99.95% Date Thu Jan 5 12:03:04 GMT 2012 Rank 117 Aligned Residues 332 % Identity 11% Template c2o1bA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class i; PDBTitle: structure of aminotransferase from staphylococcus aureus Resolution 1.95 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																			.																																																	.	.	.	.
Query SS confidence																			.																																																	.	.	.	.
Query Sequence		M	K	T	F	P	L	Q	S	L	T	I	I	E	A	Q	Q	K	.	Q	F	A	L	V	D	S	I	C	R	H	F	P	G	S	E	F	L	T	G	G	D	L	G	L	T	P	G	L	N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	.	.	.	.	Q	A	A	A	L	V	Q	G	A	G
Query Conservation																			.																																																	.	.	.	.
Alig confidence																			.																		.	.	.	.	.																											.	.	.	.
Template Conservation																																					.	.	.	.	.
Template Sequence		H	G	P	L	P	L	I	N	X	A	V	G	I	P	D	G	P	T	P	Q	G	I	I	D	H	F	Q	K	A	L	T	I	P	E	N	.	.	.	.	.	Q	K	Y	G	A	F	H	G	K	E	A	F	K	Q	A	I	V	D	F	Y	Q	R	Q	Y	N	V	T	L	D	K	E	D	E	V	C	I	L	Y	G	T
Template Known Secondary structure				S	S									S		S	S														T	T					.	.	.	.	.		S				T	T																							T	T	T	S					S	S
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																			.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.
Query Sequence		T	G	A	I	R	A	G	L	A	A	L	L	K	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	D	L	S	.	.	.	.	.	A	L	K	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S
Query Conservation																																																			.	.	.	.	.
Alig confidence																						.																													.	.	.	.	.
Template Conservation																						.
Template Sequence		K	N	G	L	V	A	V	P	T	C	V	I	N	P	G	D	Y	V	L	L	.	P	D	P	G	Y	T	D	Y	L	A	G	V	L	L	A	D	G	K	P	V	P	L	N	L	E	P	P	H	Y	L	P	D	W	S	K	V	D	S	Q	I	I	D	K	T	K	L	I	Y	L	T	Y	P	N	N	P	T	G	S	T
Template Known Secondary structure															T	T						.			S			S	S								T	T										T	T	T					G	G	G	S															S	S		T	T	T
Template Predicted Secondary structure																						.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		151	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.																															.	.	.	.	.	.	.																					.	.
Query SS confidence				.	.	.																															.	.	.	.	.	.	.																					.	.
Query Sequence		Y	V	.	.	.	L	A	D	V	L	A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	K	V	A	R	I	G	.	.	.	.	.	.	.	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	P	E	G	.	.	V	G	A	V	V	G	D	A	D	V	I	N	R	I	R	A
Query Conservation				.	.	.																															.	.	.	.	.	.	.																					.	.
Alig confidence				.	.	.																															.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		A	T	K	E	V	F	D	E	A	I	A	K	F	K	G	T	D	T	K	I	V	H	D	F	A	Y	G	A	F	G	F	D	A	K	N	P	S	I	L	A	S	E	N	G	K	D	V	A	I	E	I	Y	S	L	S	K	G	Y	N	X	S	G	F	R	V	G	F	A	V	G	N	K	D	X	I	Q	A	L	K	K
Template Known Secondary structure															T	T	S	S								T	T	T	T		B	S	S	S					G	G	G	S	T	T											S	T	T	T	T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		T	L	Y	S	G	G	S	Q	I	Q	G	A	Q	A	L	E	V	L	R	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A	V	I	A	N	A	Q	S	K	V	L	I	V	E	F	H	.	Q	P	I	A	A	R	V	L	E	E	A
Query Conservation																																																																						.
Alig confidence																																																			.																			.
Template Conservation																																																			.
Template Sequence		Y	Q	T	H	T	N	A	G	X	F	G	A	L	Q	D	A	A	I	Y	A	L	N	H	Y	D	D	F	L	E	E	Q	S	N	V	F	K	T	R	R	D	R	F	E	A	X	L	A	K	A	.	D	L	P	F	V	H	A	K	G	G	I	Y	V	W	L	E	T	P	P	G	Y	D	S	E	Q	F	E	Q	F	L
Template Known Secondary structure																																																		T	.	T								B	S	S								T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
			298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	S	G	E	E	T	V	L	R	I	L	R	E	S	I	A	S	I
Query Conservation		.
Alig confidence		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Sequence		V	Q	E	K	S	I	L	V	A	P	G	K	P	F	G	E	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	Y	V	R	I	S	L	A	.	.	L	D	D	Q	K	L	D	E	A	A	I	R	L	T	E	L
Template Known Secondary structure												S	G	G	G		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								.	.	S		T	T											G	G
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.																					.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions