Job Description P45545 Confidence 100.00% Date Thu Jan 5 12:03:04 GMT 2012 Rank 44 Aligned Residues 351 % Identity 10% Template c2hdyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:selenocysteine lyase; PDBTitle: structure of human selenocysteine lyase Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		Q	S	L	T	I	I	E	A	Q	Q	K	Q	F	A	L	V	D	S	I	C	R	H	F	P	G	S	E	F	L	T	G	G	D	L	G	L	T	P	G	L	N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	A	A	A	L	V	Q	G	A	G	.	T	G	A	I	R	A	G	L	A	A
Query Conservation																																																																							.
Alig confidence																									.	.																																													.
Template Conservation																									.	.
Template Sequence		V	Y	M	D	Y	N	A	T	T	P	L	E	P	E	V	I	Q	A	M	T	K	A	M	.	.	W	E	A	W	G	N	P	S	S	P	Y	S	A	G	R	K	A	K	D	I	I	N	A	A	R	E	S	L	A	K	M	I	G	G	K	P	Q	D	I	I	F	T	S	G	G	T	E	S	N	N	L	V	I	H	S
Template Known Secondary structure					B	T	T	T																	.	.			S		S		T	T		S	S																						T			G	G	G					S
Template Predicted Secondary structure																									.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		86									.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.																						.	.	.																.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.																						.	.	.																.	.	.	.	.
Query Sequence		L	.	.	.	.	.	.	.	.	L	K	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	.	.	.	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	D	.	.	.	.	.	L	S	A	L	K	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D
Query Conservation			.	.	.	.	.	.	.	.																						.	.	.																.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																						.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		V	V	K	H	F	H	A	N	Q	T	G	A	K	P	H	F	I	T	S	S	V	E	H	D	S	I	R	L	P	L	E	H	L	V	E	E	Q	V	A	A	V	T	F	V	P	V	S	K	V	S	G	Q	T	E	V	D	D	I	L	A	A	V	R	P	T	T	R	L	V	T	I	M	L	A	N	N	E	T	G	I
Template Known Secondary structure																					T	T															T	T	S										T	T	T	S	S									T			T	T								S	B		T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.											.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Y	V	L	A	D	V	L	A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	.	.	.	.	.	.	.	.	.	.	V	M	K	V	A	R	I	G	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	P	E	G	V	G	A	V	V	G	D	A	D	V	I	N	R	I	R	A	T
Query Conservation																											.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	M	P	V	P	E	I	S	Q	R	I	K	A	L	N	Q	E	R	V	A	A	G	L	P	P	I	L	V	H	T	D	A	A	Q	A	L	G	K	Q	R	V	D	V	E	D	L	G	V	D	F	L	T	I	V	G	H	K	F	Y	G	P	R	I	G	A	L	Y	I	R	G	L	G	E	F	T	P	L	Y	P	M
Template Known Secondary structure		B																				T	T											T	T	T	T	T	T	S										S						G	G	G	T	T	S		S							T	T	B	T	T	T	B					S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		220	.	.	.	.								.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270									.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.
Query Sequence		L	Y	S	G	G	.	.	.	.	.	.	.	S	Q	I	Q	G	A	Q	A	L	E	V	L	R	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	.	.	.	.	.	.	.	.	A	V	I	A	N	A	Q	S	K	V	L	I	V	E
Query Conservation							.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	G	G	G	Q	E	R	N	F	R	P	G	T	E	N	T	P	M	I	A	G	L	G	K	A	A	E	L	V	T	Q	N	C	E	A	Y	E	A	H	M	R	D	V	R	D	Y	L	E	E	R	L	E	A	E	F	G	Q	K	R	I	H	L	N	S	Q	F	P	G	T	Q	R	L	P	N	T	C	N	F	S
Template Known Secondary structure				S	S		G	G	G	G	T	S		S																																													G	G	G				S	S			T	T			B		S	S
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	Q	P	I	A	A	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	S	G	E	E	T	V	L	R	I	L	R	E	S	I	A	S	I
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		I	R	G	P	R	L	Q	G	H	V	V	L	A	Q	C	R	V	L	M	A	S	V	G	A	A	C	H	S	D	H	G	D	Q	P	S	P	.	.	V	L	L	S	Y	G	V	P	F	D	V	A	R	N	A	L	R	L	S	V	G	R	S	T	T	R	A	E	V	D	L	V	V	Q	D	L	K	Q	A
Template Known Secondary structure					T	T											S	S				B	S	S	S	S			S	S		S	S					.	.					T	T								T								S	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.			.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions