Job Description P45545 Confidence 23.70% Date Thu Jan 5 12:03:04 GMT 2012 Rank 360 Aligned Residues 137 % Identity 13% Template c2eyqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of escherichia coli transcription-repair2 coupling factor Resolution 3.20 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.			.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																					.	.						.	.					.																									.	.	.	.	.	.
Query SS confidence																					.	.						.	.					.																									.	.	.	.	.	.
Query Sequence		Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	.	.	A	A	A	L	V	.	.	Q	G	A	G	.	T	G	A	I	R	A	G	L	A	A	L	L	K	P	G	Q	R	L	L	V	H	D	A	P	.	.	.	.	.	.	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I
Query Conservation																					.	.						.	.					.																									.	.	.	.	.	.
Alig confidence																					.	.						.	.					.																									.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	D	Q	A	Q	A	I	N	A	V	L	S	D	M	C	Q	P	L	A	M	D	R	L	V	C	G	D	V	G	F	G	K	T	E	V	A	M	R	A	A	F	L	A	V	D	N	H	K	Q	V	A	V	L	V	P	T	T	L	L	A	Q	Q	H	Y	D	N	F	R	D	R	F	A	N	W	P	V	R	I	E
Template Known Secondary structure																		S	S	S												T	T	T													T	T	T								S	S															S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		602	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.
		117	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																																													.												.	.	.
Query SS confidence							.	.	.	.																																													.												.	.	.
Query Sequence		T	V	D	F	N	.	.	.	.	D	L	S	A	L	K	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	L	A	D	V	L	A	T	L	R	A	A	G	V	.	P	A	L	T	D	D	N	Y	A	V	M	.	.	.	K	V	A	R	I	G	C	E	C	G	A	N
Query Conservation							.	.	.	.																																													.												.	.	.
Alig confidence							.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.													.												.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	S	R	F	R	S	A	K	E	Q	T	Q	I	L	A	E	V	A	E	G	K	I	D	I	L	I	G	T	H	.	.	.	.	.	.	.	.	.	.	.	K	L	L	Q	S	D	V	K	F	K	D	L	G	L	L	I	V	D	E	E	H	R	F	G	V	R	H	K	E	R	I	K	A	M	R	A	N	V	D
Template Known Secondary structure				S	T	T	S														T	T			S						T	.	.	.	.	.	.	.	.	.	.	.					S					S	S								S	G	G	G	S													T	T	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		682	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.												.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750
		189	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	T	F	S	C	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	T	L	T	A	T
Template Known Secondary structure							S	S
Template Predicted Secondary structure
Template SS confidence
		751	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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