Job Description P45545 Confidence 99.69% Date Thu Jan 5 12:03:04 GMT 2012 Rank 235 Aligned Residues 312 % Identity 12% Template c2cjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:l-lysine-epsilon aminotransferase; PDBTitle: lysine aminotransferase from m. tuberculosis in external2 aldimine form Resolution 2.00 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	V	D	S	I	C	R	H	F	P	G	S	E	F	L	T	G	G	D	L	G	L	T	P	G	L	N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	.	.	A	A	A	L	V	Q	G	A	G	T	G	A	I	R	A	G	L	A	A	L	L	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.																						.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																																			.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.
Template Sequence		A	L	V	D	D	R	E	F	H	A	.	.	.	E	L	M	Q	A	A	L	N	K	P	S	N	S	D	V	Y	S	V	A	M	A	R	F	V	E	T	F	A	R	V	L	G	D	P	A	L	P	H	L	F	F	V	E	G	G	A	L	A	V	E	N	A	L	K	A	A	F	D	W	K	S	R	H	N	Q	A	H
Template Known Secondary structure					T							.	.	.							T					T	T	T																				T	T								S	S																							T
Template Predicted Secondary structure												.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
						88	.	90	.	.	.	.	.	.	.	.	.	100	.	.														.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																.	.	.	.	.	.	.	.	.	130	.			.	.
Predicted Secondary structure		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		.	.	.	.	K	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	L	S	A	L	K	Q	V	V	D	.	.	E	Q
Query Conservation		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		G	I	D	P	A	L	G	T	Q	V	L	H	L	R	G	A	F	H	G	R	S	G	Y	T	L	S	L	T	N	T	K	P	T	I	T	A	R	F	P	K	F	D	W	P	R	I	D	A	P	Y	M	R	P	G	L	D	E	P	A	M	A	A	L	E	A	E	A	L	R	Q	A	R	A	A	F	E	T	R	P	H
Template Known Secondary structure		T	S		T	T									T	T					S	S	T	T	G	G	G	T			S						T	T	S															T	T																								S	T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																					.	.	.	.																									.	.	.	.	.
Query SS confidence																					.	.	.	.																									.	.	.	.	.
Query Sequence		Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	.	.	.	.	L	A	D	V	L	A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	.	.	.	.	.	K	V	A	R	I	G	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	P	E	G	V	G
Query Conservation																					.	.	.	.																									.	.	.	.	.
Alig confidence																					.	.	.	.																									.	.	.	.	.
Template Conservation
Template Sequence		D	I	A	C	F	V	A	E	P	I	Q	G	E	G	G	D	R	H	F	R	P	E	F	F	A	A	M	R	E	L	C	D	E	F	D	A	L	L	I	F	D	E	V	Q	T	G	C	G	L	T	G	T	A	W	A	Y	Q	Q	L	D	V	A	P	D	I	V	A	F	G	K	K	T	Q	V	C	G	V	M	A	G
Template Known Secondary structure		T								S			S	T	T	T																			T	T								T	T	T	T	T	T	T	T	S	S	S	S	T					T				S						G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		A	V	V	G	D	A	D	V	I	N	R	I	R	A	T	L	Y	S	G	G	S	Q	I	Q	G	A	Q	A	L	E	V	L	R	G	L	V	F	A	P	V	M	.	.	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A	V	I	A	N	A	Q	S	K	V	L	I
Query Conservation																																											.	.
Alig confidence																																											.	.
Template Conservation
Template Sequence		R	R	V	D	E	V	A	D	N	V	F	A	V	P	S	R	L	N	S	T	W	G	G	N	L	T	D	M	V	R	A	R	R	I	L	E	V	I	E	A	E	G	L	F	E	R	A	V	Q	H	G	K	Y	L	R	A	R	L	D	E	L	A	A	D	F	P	A	V	V	L	D	P	R	G	R	G	L	M	C	A
Template Known Secondary structure		G	G	G	G	G	S	T	T		T	T	T	S	T	T	S	S			S	S	S	S																			T																							S	T	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		283	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		V	E	F	H	Q	P	I	.	A	A	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	S	G	E	E	T	V	L	R	I	L	R	E	S	I	A	S
Query Conservation									.
Alig confidence									.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	S	L	P	T	T	A	D	R	D	E	L	I	R	Q	L	W	Q	R	A	V	I	V	L	P	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	T	V	R	F	R	P	P	L	T	V	S	T	A	E	I	D	A	A	I	A	A	V	R	S
Template Known Secondary structure					S	S														T	T							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.																											.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions