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Job DescriptionP45545
Confidence99.90%DateThu Jan 5 12:03:04 GMT 2012
Rank184Aligned Residues297
% Identity14%Templatec1z7dE_
PDB info PDB header:transferaseChain: E: PDB Molecule:ornithine aminotransferase; PDBTitle: ornithine aminotransferase py00104 from plasmodium yoelii
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.........80.........90.........
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Query Sequence  ALVDSICRHFPGSEFLTGGDLGLTPGLNQPRVTQRVEQVLADAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAP
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Template Sequence  NILNAMINQAKNL. . . . . . . . TICSRAFFSVPLGICERYLTNLLGYD. KVLMMNTGAEANETAYKLCRKWGYEVKKIPEN
Template Known Secondary structure  TT
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TTS

T
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TT
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   65....70....... ..80.........90.........100... ......110.........120.........130.....
 
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Query Sequence  VYPTTRVIIEQMGLTLITVDFNDLSALKQVVDEQQPDAALVQHTRQQPQDSYV. . . . LADVLATLRAAGVPALTDDNYAV
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Template Sequence  MA. . . . . . . . KIVVCFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTG
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TT
TSTT
SSBSTTT
B


TTTT

TTTT
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   136. ..140.........150.........160.........170.........180.........190.........200.......
 
   176...180.........190.........200.........210.........220.........230.........240.... ....
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Query Sequence  . . . . . MKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLVFAPV. . MHAV
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Template Sequence  LGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCEN
Template Known Secondary structure  TTTTSSSSGGGGGT


S
GGGGTTSS


TT









TT
TT
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   238.240.........250.........260.........270.........280.........290.........300.........310.......
 
   249250.........260.........270.........280..... ....290.........300.........310.........320......
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Query Sequence  QAGVSERLLALLNGGAVPEVKSAVIANAQSKVLIVEF. . HQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFYRLSGTF
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Template Sequence  AEKLGGPFLENLKRELKDSK. IVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDVH. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTT
T.TTT
TTT

TT

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   318.320.........330....... ..340.........350.........360.........370........
 
   327..330.........340.........350.........360
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Query Sequence  RQANPQSEHCAIRINPNRSGEETVLRILRESIAS
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Template Sequence  . . . . . . . . DKTIRLTPPLCITKEQLDECTEIIVK
Template Known Secondary structure  ........TT


TT

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   379380.........390.........400....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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