 |
Job Description | P76291 | Confidence | 99.76% | Date | Thu Jan 5 12:21:36 GMT 2012 |
Rank | 145 | Aligned Residues | 127 |
% Identity | 12% | Template | d2igta1 |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| hypothetical RNA methyltransferase
|
Resolution | 1.89 |
|
 |
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
. | . | . | . | . | . | 180 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |  |  |  |  |  |
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | D | W | K | W | D | R | V | L | P | H | L | S | D | L | . |
T | G | R | T | I | L | D | V | G | C | G | S | G | Y | H | M | W | R | M | I | G | A | G | A | H | L | A | V | G | I | D | P | T | Q | L | F | L | C | Q | F | E | A | V | R | K | L | L | G | N | D | Q | R | . |
A | H | L | L | P | L | G | I | E | Q | L |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . |   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|
| . |   |
|   |   |
|
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
Q | I | V | H | W | E | W | L | K | N | A | V | E | T | A | D | R | P | L | K | V | L | N | L | F | G | Y | T | G | V | A | S | L | V | A | A | A | A | G | A | . |
E | V | T | H | V | D | A | S | K | K | A | I | G | W | A | K | E | N | Q | V | L | A | G | L | E | Q | A | P | I | R | W | I | C | E | D | A | X | K | F |
Template Known Secondary structure |   |
G |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
|  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  |  | T | T |
| . |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T | S |
|  |  |  |  |
| S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
  |
  |   |
|
|
|
|
|
185 | . | . | . | . | 190 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
P | A | L | K | A | F | D | T | V | F | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | G | V | L | Y | H | R | R | S | P | L | E | H | L | W | Q | L | K | D | Q | L | V | N | E | G | E | L | V | L | E | T | L | V | I | D | G | D | E | N |
Query Conservation |   |
. | . | . | . | . |   |   |   |   |   |
|
|   |
|   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |
Template Sequence |   |
I | Q | R | E | E | R | R | G | S | T | Y | D | I | I | L | T | D | P | P | K | F | G | R | G | T | H | G | E | V | W | Q | L | F | D | H | L | P | L | X | L | D | I | C | R | E | I | L | S | P | K | A | L | G | L | V | L | T | A | Y | S | I | R | A | S | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
|
| B | S |  |  |  |  |
|
|
| S |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | B |
| T | T |
|
|  |  |  |  |  |  |
|
| T | T | S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|