Job Description P76291 Confidence 95.73% Date Thu Jan 5 12:21:36 GMT 2012 Rank 330 Aligned Residues 118 % Identity 21% Template c3pvcA_ PDB info PDB header:oxidoreductase, transferase Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of apo mnmc from yersinia pestis Resolution 2.31 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.														.	.	.	.	150	.	.				.	.	.	.	.	.	.												160	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.								.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.								.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	L	D	V	G	C	G	S	G	Y	H	M	W	R	M	I	G	A	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	A	V	G	I	D	.	.	.	P	T	Q	L	F	L	C	.	.	.	.	.	.	.	.	.	.	.	Q	F	E	A	V	R	K	L	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.								.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.								.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	F	A	E	T	G	F	G	T	G	L	N	F	L	T	L	W	R	D	F	A	L	F	R	Q	Q	S	P	N	A	T	L	R	R	L	H	Y	I	S	F	E	K	Y	P	L	H	V	A	D	L	A	S	A	H	A	R	W	P	E	L	A	S	F	A	E	Q	L	R	A	Q	W	P	L	P	L	A	G	C	H	R
Template Known Secondary structure									T	T	S																		T	T	S	S											S	S												T	T		G	G	G										T						S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
					168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.	.																							.	.	.	.	.	.																		.	.	.	.
Query SS confidence		.	.	.																							.	.	.	.	.	.																		.	.	.	.
Query Sequence		.	.	.	L	G	N	D	Q	R	A	H	L	L	P	L	G	I	E	Q	L	P	A	L	K	A	.	.	.	.	.	.	F	D	T	V	F	S	M	G	V	L	Y	H	R	R	S	P	L	.	.	.	.	E	H	L	W	Q	L	K	D	Q	L	V	N	E	G	E	L	V	L	E	T	L	V	I	D	G	D	E	N
Query Conservation		.	.	.																							.	.	.	.	.	.																		.	.	.	.
Alig confidence		.	.	.																							.	.	.	.	.	.												.	.	.				.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.																												.	.	.	.	.	.	.	.
Template Sequence		I	L	L	A	D	G	A	I	T	L	D	L	W	F	G	D	V	N	T	L	L	P	T	L	D	D	S	L	N	N	Q	V	D	A	W	F	L	D	G	F	A	P	.	.	.	N	P	D	X	W	N	E	Q	L	F	N	A	X	A	R	X	T	R	P	G	G	T	F	S	T	F	T	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T	T	T								S						G	G	G			G	G	G	T	T									S	S			.	.	.			T	T		S																				S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.																												.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	L	V	P	G	D	R	Y	A	Q	M	R	N	V	Y	F	I	P	S	A	L	A	L	K	N	W	L	K	K	C	G	F	V	D	I	R	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	G	F	V	R	R	G	L	Q	Q	A	G	F	N	V	T	K	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions