Job Description P76291 Confidence 96.20% Date Thu Jan 5 12:21:36 GMT 2012 Rank 321 Aligned Residues 169 % Identity 14% Template c3ieiD_ PDB info PDB header:transferase Chain: D: PDB Molecule:leucine carboxyl methyltransferase 1; PDBTitle: crystal structure of human leucine carboxylmethyltransferase-1 in2 complex with s-adenosyl homocysteine Resolution 1.90 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	S	D	W	K	W	D	R	V	L	P	H	L	S	D	L	T	G	R	T	.	I	L	D	V	G	C	G	S	G	Y	H	M	W	R	M	I	G	A	G	A	H	L	A	V	G	I	D	P	T	Q	L	F	L	C	Q	F	E	A	V	R	K	L	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	H	G	V	S	Q	L	I	K	A	F	L	R	K	T	E	C	H	C	Q	I	V	N	L	G	A	G	M	D	T	T	F	W	R	L	K	D	E	D	L	L	S	S	K	Y	F	E	V	D	F	P	M	I	V	T	R	K	L	H	S	I	K	C	K	P	P	L	S	S	P	I	L	E	L	H	S	E	D	T
Template Known Secondary structure																	T	T	T		S						T		T	T										T	T				S																															T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
										170	.	.	.	.	.	.	.	.	.	180	.	.	.	.												.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		.	.	.	.	.	.	.	.	N	D	Q	R	A	H	L	L	P	L	G	I	E	Q	L	.	.	.	.	.	.	.	.	.	.	.	P	A	L	K	A	F	D	T	V	F	S	M	G	V	L	Y	H	R	.	.	R	S	P	L	E	H	L	W	Q	L	K	D	Q	L	V	N	E	G	E	L	V	L	E	T	L	V
Query Conservation		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		L	Q	M	D	G	H	I	L	D	S	K	R	Y	A	V	I	G	A	D	L	R	D	L	S	E	L	E	E	K	L	K	K	C	N	M	N	T	Q	L	P	T	L	L	I	A	E	C	V	L	V	Y	M	T	P	E	Q	S	A	N	L	L	K	W	A	A	N	S	F	E	R	A	M	F	I	N	Y	E	Q	V	N
Template Known Secondary structure			B			T	T					S	S								T	T												T	T			T	T	S								S		G	G	G	S																	S	S										S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		I	D	G	D	E	N	T	V	L	V	P	G	D	R	Y	A	Q	.	.	M	R	N	V	Y	F	I	P	S	A	L	A	L	K	N	W	L	K	K	C	G	F	V	D	I	R	I	A	D
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		M	G	D	R	F	G	Q	I	M	I	E	N	L	R	R	R	Q	C	D	L	A	G	V	E	T	C	K	S	L	E	S	Q	K	E	R	L	L	S	N	G	W	E	T	A	S	A	V	D
Template Known Secondary structure		T	T	S													T	T				T	T	G	G	G	G	S											T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions