Return to main results Retrieve Phyre Job Id

Job DescriptionP76291
Confidence78.37%DateThu Jan 5 12:21:36 GMT 2012
Rank436Aligned Residues105
% Identity17%Templatec3gg2B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:sugar dehydrogenase, udp-glucose/gdp-mannose PDBTitle: crystal structure of udp-glucose 6-dehydrogenase from2 porphyromonas gingivalis bound to product udp-glucuronate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.. .......140.........150.........160. ........170.........180.........190
Predicted Secondary structure 



.








............














Query SS confidence 








.




























. . . . . . . . . . . .




























Query Sequence  RTILDVGCG. SGYHMWRMIGAGAHLAVGIDPTQLFLCQF. . . . . . . . . . . . EAVRKLLGNDQRAHLLPLGIEQLPALKAF
Query Conservation   







.

     
       
 
 
 
      
............                  
         
Alig confidence 








.




























............






















...


Template Conservation 


 




 

   
  

  
  
   
     
  
  
     
               
  
    

 ...  
Template Sequence  LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAV. . . PEA
Template Known Secondary structure 


STT

S
TT

SS

TTTTSS
G...GG
Template Predicted Secondary structure 






















...


Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150.. ...
 
   191...... ..200.........210.........220.........230.
Predicted Secondary structure 

.......









Query SS confidence 






. . . . . . .

































Query Sequence  DTVFSMG. . . . . . . VLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDG
Query Conservation 
 
    .......

         
      




 


       
Alig confidence 






.......

































Template Conservation 




 
 

       
   
      

  
    


  


 

Template Sequence  DIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVG
Template Known Secondary structure  S




B
TTSSB



S


S


TT
Template Predicted Secondary structure 






















Template SS confidence 















































   156...160.........170.........180.........190.........200...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions