Return to main results Retrieve Phyre Job Id

Job DescriptionP76291
Confidence99.64%DateThu Jan 5 12:21:36 GMT 2012
Rank196Aligned Residues106
% Identity19%Templatec3g8aF_
PDB info PDB header:transferaseChain: F: PDB Molecule:ribosomal rna small subunit methyltransferase g; PDBTitle: t. thermophilus 16s rrna g527 methyltransferase in complex with adohcy2 in space group p61
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130.........140...... ...150.........160.........170.........180... .....
Predicted Secondary structure 















.










....




Query SS confidence 
































.




































. . . .




Query Sequence  VLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAH. LAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLGIEQ. . . . LPALK
Query Conservation 
        
 









     
      . 
 
 
 
      
                  
   ....     
Alig confidence 
































.
























.










....




Template Conservation 
           






 
 


 

   
   
  

   
    
      


 .

  
  
 
          
Template Sequence  LLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK. GARALWGRAEVLAREAGHRE
Template Known Secondary structure  GGGSS


SS
T
TTTTT
TT
S
T
S.S

TTSTTTTT
Template Predicted Secondary structure 





















.










Template SS confidence 















































































   72.......80.........90.........100.........110.........120.........130 .........140.........150
 
   189190.........200.........210.........220....
Predicted Secondary structure 








Query SS confidence 



































Query Sequence  AFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVL
Query Conservation   

 
    

         
      




 


Alig confidence 






....
























Template Conservation   

 
 
....


      
      




 

 
Template Sequence  AYARAVA. . . . RAVAPLCVLSELLLPFLEVGGAAVA
Template Known Secondary structure 
....
SS
GGG
Template Predicted Secondary structure 

....








Template SS confidence 



































   151...... ..160.........170.........180..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions