Job Description P76291 Confidence 99.32% Date Thu Jan 5 12:21:36 GMT 2012 Rank 237 Aligned Residues 105 % Identity 11% Template c3fydA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable dimethyladenosine transferase; PDBTitle: crystal structure of dim1 from the thermophilic archeon,2 methanocaldococcus jannaschi Resolution 1.75 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		D	R	V	L	P	H	L	S	D	L	T	G	R	T	I	L	D	V	G	C	G	S	G	Y	H	M	W	R	M	I	G	A	G	A	H	L	A	V	G	I	D	P	T	Q	L	F	L	C	Q	F	E	A	V	R	K	L	L	G	N	D	Q	R	A	H	L	L	P	L	G	I	E	Q	L	P	A	L	.	K	A	F
Query Conservation																																																																														.
Alig confidence																																				.																								.	.	.																.
Template Conservation																																				.																								.	.	.
Template Sequence		N	K	A	V	E	S	A	N	L	T	K	D	D	V	V	L	E	I	G	L	G	K	G	I	L	T	E	E	L	A	K	N	A	K	.	K	V	Y	V	I	E	I	D	K	S	L	E	P	Y	A	N	K	L	K	E	L	Y	N	.	.	.	N	I	E	I	I	W	G	D	A	L	K	V	D	L	N	K	L	D	F
Template Known Secondary structure								T	T			T	T									T	T	S										S	S	.							S		G	G	G												S	.	.	.	S						S		T	T	T	S		G	G	G
Template Predicted Secondary structure																																				.																								.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.														210	.	.	.	.	.	.			.	.	.	220
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Query Sequence		D	T	V	F	S	M	G	V	L	Y	H	R	R	S	P	L	E	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Q	L	K	D	Q	L	.	.	V	N	E	G
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation
Template Sequence		N	K	V	V	A	N	L	P	Y	Q	I	S	S	P	I	T	F	K	L	I	K	R	G	F	D	L	A	V	L	M	Y	Q	Y	E	F	A	K	R	M	V	A	A	A	G	T
Template Known Secondary structure		S								G	G	G														S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions