 |
Job Description | P76291 | Confidence | 97.97% | Date | Thu Jan 5 12:21:36 GMT 2012 |
Rank | 301 | Aligned Residues | 108 |
% Identity | 12% | Template | c3cvoA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:methyltransferase-like protein of unknown function; |
PDBTitle: crystal structure of a methyltransferase-like protein (spo2022) from2 silicibacter pomeroyi dss-3 at 1.80 a resolution
|
Resolution | 1.80 Å |
|
 |
  |   |
122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
T | G | R | T | I | L | D | V | G | C | G | S | G | Y | H | M | W | R | M | I | G | A | G | A | H | L | A | V | G | I | D | P | T | Q | L | F | L | C | Q | F | E | A | V | R | K | L | L | G | N | D | Q | R | A | H | L | L | P | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |
|
|
|   |
|
| . | . |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | A | E | V | I | L | E | Y | G | S | . |
. |
G | G | S | T | V | V | A | A | E | L | P | G | K | H | V | T | S | V | E | S | D | R | A | W | A | R | X | X | K | A | W | L | A | A | N | P | P | A | E | G | T | E | V | N | I | V | W | T | D | I | G | P | T | G | D | W | G | H | P | V | S | D | A | K | W | R | S | Y |
Template Known Secondary structure |   |
 |
| S |  |  |  |  |  | S |
| . | . | S |  |  |  |  |  |  |  | T | S | T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| T | T |
|  |  |  |  |  |  |
|
|
| S | S | B |
| G | G | G |
| B | S | S | S | T | T | G | G | G | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | |
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . |
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
G | I | E | Q | L | P | A | L | K | A | F | D | T | V | F | S | M | G | V | L | Y | H | R | R | S | P | L | E | H | L | W | Q | L | K | D | Q | L | V | N | E | G | E | L | V | L | E | T | L | V | I | D | G | D | E | N | T | V |
Query Conservation |   |
. | . | . | . | . |
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |
|
Template Sequence |   |
P | D | Y | P | L | A | V | W | R | T | E | G | F | R | H | P | D | V | V | L | V | D | G | . |
. |
. |
. |
. |
R | F | R | V | G | C | A | L | A | T | A | F | S | I | T | R | P | V | T | L | L | F | D | D | Y | S | Q | R | R | W | Q | H | Q | V |
Template Known Secondary structure |   |
T |  |  |  |  | G | G | G | G |
| T | T |
|
|
|
| S |  |  |  |  |
| S | . | . | . | . | . | S | S |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  | T | T | G | G | G |
| S | S | G | G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|