Return to main results Retrieve Phyre Job Id

Job DescriptionP76291
Confidence99.21%DateThu Jan 5 12:21:36 GMT 2012
Rank246Aligned Residues100
% Identity18%Templatec3axtA_
PDB info PDB header:transferaseChain: A: PDB Molecule:probable n(2),n(2)-dimethylguanosine trna methyltransferase PDBTitle: complex structure of trna methyltransferase trm1 from aquifex aeolicus2 with s-adenosyl-l-methionine
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140..... ....150.........160.........170.. .......180.... .....190.....
Predicted Secondary structure 










..








.



...






Query SS confidence 























. .


























.











. . .










Query Sequence  TGRTILDVGCGSGYHMWRMIGAGA. . HLAVGIDPTQLFLCQFEAVRKLLGNDQ. RAHLLPLGIEQL. . . PALKAFDTVFS
Query Conservation   
 









     
     ..  
 
 
 
      
           .       
    ...     

 
  
Alig confidence 























..


























.











...








..
Template Conservation      


  



 



 
 
      
 
 


  

  
  
   


    
 
   

   
       



..
Template Sequence  RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYV. .
Template Known Secondary structure  S
SS
TTT
S

S
TT

GGG
S
TS

SS
..
Template Predicted Secondary structure 






























..
Template SS confidence 















































































   52.......60.........70.........80.........90.........100.........110.........120.........
 
   196...200.........210.........220.....
Predicted Secondary structure 





Query SS confidence 





























Query Sequence  MGVLYHRRSPLEHLWQLKDQLVNEGELVLE
Query Conservation    

         
      




 


 
Alig confidence  ..



























Template Conservation  ..






   




   

 



 

Template Sequence  . . DLDPFGTPVPFIESVALSMKRGGILSLT
Template Known Secondary structure  ..

SS

Template Predicted Secondary structure  ..








Template SS confidence 





























   130.........140.........150.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions