Job Description P76291 Confidence 98.43% Date Thu Jan 5 12:21:36 GMT 2012 Rank 287 Aligned Residues 118 % Identity 13% Template c2wa1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:non-structural protein 5; PDBTitle: structure of the methyltransferase domain from modoc virus,2 a flavivirus with no known vector (nkv) Resolution 2.00 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		R	S	D	W	K	W	D	R	V	L	P	H	L	S	D	L	T	G	R	T	I	L	D	V	G	C	G	S	G	Y	H	M	W	R	M	I	G	A	.	G	A	H	L	A	V	G	I	D	P	T	Q	L	F	L	C	Q	F	E	A	V	R	K	L	L	G	N	D	Q	R	A	H	L	L	P	L	G	I	E	Q	L
Query Conservation																																								.
Alig confidence																																								.														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	T	A	K	L	A	W	I	D	E	R	G	G	V	E	L	K	G	T	V	V	D	L	G	C	G	R	G	S	W	S	Y	Y	A	A	S	Q	P	N	V	R	E	V	K	A	Y	T	L	G	T	S	.	.	.	.	.	.	.	.	.	.	G	H	E	K	P	R	L	V	E	T	F	G	W	N	L	I	T	F
Template Known Secondary structure													T	T	S											T		T	T	S								T	S	T	T											S	T	.	.	.	.	.	.	.	.	.	.	T	S									T	T	G	G	G
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		185									.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.							.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.																	.	.	.	.	.	.																	.	.
Query SS confidence			.	.	.	.	.	.	.	.																	.	.	.	.	.	.																	.	.
Query Sequence		P	.	.	.	.	.	.	.	.	A	L	K	A	F	D	T	V	F	S	M	G	V	L	Y	H	.	.	.	.	.	.	R	R	S	P	L	E	H	L	W	Q	L	K	D	Q	L	V	.	.	N	E	G	E	L	V	L	E	T	L	V	I	D	G	D	E
Query Conservation			.	.	.	.	.	.	.	.																	.	.	.	.	.	.																	.	.
Alig confidence			.	.	.	.	.	.	.	.																	.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		K	S	K	V	D	V	T	K	M	E	P	F	Q	A	D	T	V	L	C	D	I	G	E	S	N	P	T	A	A	V	E	A	S	R	T	L	T	V	L	N	V	I	S	R	W	L	E	Y	N	Q	G	C	G	F	C	V	K	V	L	N	P	Y	S	C	D
Template Known Secondary structure				S			T	T	T							S											S	S																						S	T	T								S				S
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions