Job Description P76291 Confidence 99.82% Date Thu Jan 5 12:21:36 GMT 2012 Rank 103 Aligned Residues 153 % Identity 15% Template c2vdwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:vaccinia virus capping enzyme d1 subunit; PDBTitle: guanosine n7 methyl-transferase sub-complex (d1-d12) of the2 vaccinia virus mrna capping enzyme Resolution 2.70 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.										.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																						.									.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.									.	.	.	.	.	.	.	.	.
Query Sequence		T	G	R	T	I	L	D	V	G	C	G	S	G	Y	H	M	W	R	M	I	G	A	G	A	H	L	A	V	G	I	D	P	T	Q	L	F	L	C	Q	F	E	A	V	R	K	L	L	G	N	D	Q	R	.	A	H	L	L	P	L	G	I	.	.	.	.	.	.	.	.	.	E	Q	L	P	A	L	K	A	F	D
Query Conservation																																																						.									.	.	.	.	.	.	.	.	.
Alig confidence																																																						.									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	K	R	K	V	L	A	I	D	F	G	N	G	A	D	L	E	K	Y	F	Y	G	E	I	A	L	L	V	A	T	D	P	D	A	D	A	I	A	R	G	N	E	R	Y	N	K	L	N	S	K	Y	Y	K	F	D	Y	I	Q	E	T	I	R	S	D	T	F	V	S	S	V	R	E	V	F	Y	F	G	K	F	N
Template Known Secondary structure		S							T	T		T	T	T	T	T							T	T		S							S																													T	T	S	S	S							T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure													.	.	.																													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	F	S	M	G	V	L	Y	H	R	.	.	.	R	S	P	L	E	H	L	W	Q	L	K	D	Q	L	V	N	E	G	E	L	V	L	E	T	L	V	I	D	.	.	.	.	.	.	G	D	E	N	T	V	L	V	P	G	D	R	Y	A	Q	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.																													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	D	W	Q	F	A	I	H	Y	S	F	H	P	R	H	Y	A	T	V	M	N	N	L	S	E	L	T	A	S	G	G	K	V	L	I	T	T	M	D	G	D	K	L	S	K	L	T	D	K	K	T	F	I	I	H	K	N	L	P	S	S	E	N	Y	M	S	V	E	K	I	A	D	D	R	I	V	V	Y	N
Template Known Secondary structure							S		G	G	G	T		S	T	T	T																													T	T			S								S	S	S		T	T	T	S									T	T					B
Template Predicted Secondary structure
Template SS confidence
		674	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.
								247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	R	N	V	Y	F	I	P	S	A	L	A	L	K	N	W	L	K	K	C	G	F	V	D	I	R	I	A	D
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		P	S	T	M	S	T	P	M	T	E	Y	I	I	K	K	N	D	I	V	R	V	F	N	E	Y	G	F	V	L	V	D	N	V	D
Template Known Secondary structure		T	T	T	B	S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		754	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions