Job Description P76291 Confidence 99.16% Date Thu Jan 5 12:21:36 GMT 2012 Rank 248 Aligned Residues 111 % Identity 15% Template c2q41D_ PDB info PDB header:transferase Chain: D: PDB Molecule:spermidine synthase 1; PDBTitle: ensemble refinement of the protein crystal structure of spermidine2 synthase from arabidopsis thaliana gene at1g23820 Resolution 2.70 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.
Predicted Secondary structure																														.																						.	.	.																					.	.	.
Query SS confidence																														.																						.	.	.																					.	.	.
Query Sequence		L	P	H	L	S	D	L	T	G	R	T	I	L	D	V	G	C	G	S	G	Y	H	M	W	R	M	I	G	.	A	G	A	H	L	A	V	G	I	D	P	T	Q	L	F	L	C	Q	F	E	A	.	.	.	V	R	K	L	L	G	N	D	Q	R	A	H	L	L	P	L	G	I	E	Q	.	.	.	L	P	A	L
Query Conservation																														.																						.	.	.																					.	.	.
Alig confidence																														.																						.	.	.																					.	.	.
Template Conservation
Template Sequence		L	P	L	C	S	I	P	N	P	K	K	V	L	V	I	G	G	G	D	G	G	V	L	R	E	V	A	R	H	A	S	I	E	Q	I	D	X	C	E	I	D	K	X	V	V	D	V	S	K	Q	F	F	P	D	V	A	I	G	Y	E	D	P	R	V	N	L	V	I	G	D	G	V	A	F	L	K	N	A	A	E
Template Known Secondary structure					T	T	S	S	S								S		S	S	S							T	T		T	T																						T	T	T	G	G	G	T	T		T	T						S								S	S		S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		188	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure									.	.												.	.
Query SS confidence									.	.												.	.
Query Sequence		K	A	F	D	T	V	F	.	.	S	M	G	V	L	Y	H	R	R	S	P	.	.	L	E	H	L	W	Q	L	K	D	Q	L	V	N	E	G	E	L	V	L	E
Query Conservation									.	.												.	.
Alig confidence									.	.												.	.
Template Conservation
Template Sequence		G	S	Y	D	A	V	I	V	D	S	S	D	P	I	G	P	A	K	E	L	F	E	K	P	F	F	Q	S	V	A	R	A	L	R	P	G	G	V	V	C	T	Q
Template Known Secondary structure		S												S	S	S	G	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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