Job Description P76291 Confidence 99.30% Date Thu Jan 5 12:21:36 GMT 2012 Rank 240 Aligned Residues 96 % Identity 14% Template c2pssC_ PDB info PDB header:transferase Chain: C: PDB Molecule:spermidine synthase; PDBTitle: the structure of plasmodium falciparum spermidine synthase in its apo-2 form Resolution 2.20 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																							.																						.	.	.																						.	.
Query SS confidence																							.																						.	.	.																						.	.
Query Sequence		T	G	R	T	I	L	D	V	G	C	G	S	G	Y	H	M	W	R	M	I	G	.	A	G	A	H	L	A	V	G	I	D	P	T	Q	L	F	L	C	Q	F	E	A	.	.	.	V	R	K	L	L	G	N	D	Q	R	A	H	L	L	P	L	G	I	E	Q	L	.	.	P	A	L	K	A	F	D	T	V	F	S
Query Conservation																							.																						.	.	.																						.	.
Alig confidence																							.																						.	.	.																						.	.
Template Conservation
Template Sequence		E	P	K	N	V	L	V	V	G	G	G	D	G	G	I	I	R	E	L	C	K	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F	I	E	D	A	S	K	F	L	E	N	V	T	N	T	Y	D	V	I	I	V
Template Known Secondary structure		S										T	T									T		T	T									S																	G	G	G	G	S	T	T						S							T	T			S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	V	L	Y	H	R	R	S	P	L	E	H	L	W	Q	L	K	D	Q	L	V	N	E	G	E	L	V	L	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	D	S	S	N	F	Y	E	K	I	Y	N	A	L	K	P	N	G	Y	C	V	A	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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