Job Description P76291 Confidence 75.43% Date Thu Jan 5 12:21:36 GMT 2012 Rank 451 Aligned Residues 75 % Identity 19% Template c2nvuB_ PDB info PDB header:protein turnover, ligase Chain: B: PDB Molecule:maltose binding protein/nedd8-activating enzyme PDBTitle: structure of appbp1-uba3~nedd8-nedd8-mgatp-ubc12(c111a), a2 trapped ubiquitin-like protein activation complex Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		121	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	G	R	T	I	L	D	V	G	C	G	S	G	.	.	.	Y	H	M	W	R	M	I	G	A	G	A	H	L	A	V	G	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	Q	L	F	L	C	Q	F	E	A	V	R	K	L	L	G	N	D	Q	R	A	H	L	L	P
Query Conservation																.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.		.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		L	D	T	C	K	V	L	V	I	G	A	G	.	G	L	G	C	E	L	L	K	N	L	A	L	S	G	F	R	Q	I	H	V	I	D	M	D	T	I	D	V	S	N	L	N	R	Q	F	L	F	R	P	K	D	I	G	R	P	K	A	E	V	A	A	E	F	L	N	D	R	V	P	N	C	N	V	V	P	H	F
Template Known Secondary structure				T									S	.	S											T	T	T											B			G	G	G	G	G	T		T	T			G	G	G	T	T	S	B													S	T	T
Template Predicted Secondary structure														.
Template SS confidence
		2046	.	.	.	2050	.	.	.	.	.	.	.		.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.
		179	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		L	G	I	E	Q	L	P	A	L	.	.	K	A	F	D	T	V	F	S	M
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		N	K	I	Q	D	F	N	D	T	F	Y	R	Q	F	H	I	I	V	C	G
Template Known Secondary structure		S		G	G	G	S							T		S
Template Predicted Secondary structure
Template SS confidence
		2125	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions