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Job DescriptionP76291
Confidence89.98%DateThu Jan 5 12:21:36 GMT 2012
Rank380Aligned Residues81
% Identity17%Templatec2hwkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:helicase nsp2; PDBTitle: crystal structure of venezuelan equine encephalitis2 alphavirus nsp2 protease domain
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  DLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMG. .
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Template Sequence  KLKGRTVLVVGEK. . . . . . . . LSVPGKMVDWLSDRP. . . . . . . . . . . . . . . . EATFRARLDLGIPGDVPKYDIIFVNVRT
Template Known Secondary structure  TSS
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TTSSST................T
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GGG
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   628.630.........640 .........650..... ....660.........670.........680...
 
   198.200.........210.........220....
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Query Sequence  . . . . . . . . . VLYHRRSPLEHLWQLKDQLVNEGELVL
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Template Sequence  PYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVS
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TGGG
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   684.....690.........700.........710.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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