Return to main results Retrieve Phyre Job Id

Job DescriptionP76291
Confidence99.21%DateThu Jan 5 12:21:36 GMT 2012
Rank245Aligned Residues129
% Identity15%Templatec2frxD_
PDB info PDB header:transferaseChain: D: PDB Molecule:hypothetical protein yebu; PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110........ .120.........130.........140... ......150.........160.........170.........180
Predicted Secondary structure 
..











..













Query SS confidence 













. .
























. .




































Query Sequence  WRSDWKWDRVLPHL. . SDLTGRTILDVGCGSGYHMWRMIGA. . GAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLG
Query Conservation           
    ..    
 









     
   ..    
 
 
 
      
                  
Alig confidence 













..
























..



























.







Template Conservation 



 

      
   
  
  











  

      
 




    
   
  
  
 
  .

 
   
Template Sequence  YIQEASSXLPVAALFADGNAPQRVXDVAAAPGSKTTQISARXNNEGAILANEFSASRVKVLHANISRCGIS. NVALTHFD
Template Known Secondary structure 

TTT


SSS
TTSTTT
S
SST

.S


Template Predicted Secondary structure 























.

Template SS confidence 















































































   98.100.........110.........120.........130.........140.........150.........160........ .170......
 
   181.... ....190..... ....200.........210.........220.........230....
Predicted Secondary structure 

..





......................













Query SS confidence 




. .









. . . . . . . . . . . . . . . . . . . . . .






































Query Sequence  IEQLP. . ALKAFDTVFS. . . . . . . . . . . . . . . . . . . . . . MGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDEN
Query Conservation       ..    

 
  ......................  

         
      




 


          
Alig confidence 




..









......................






































Template Conservation             

 








 
  

 
     

         

  

  
   

 

 






    

Template Sequence  GRVFGAAVPEXFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEEN
Template Known Secondary structure  STTSTT





GGGGGT
TTSSSS

TS

SSTTT
Template Predicted Secondary structure 

































Template SS confidence 













































































   177..180.........190.........200.........210.........220.........230.........240.........250....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions