 |
Job Description | P76291 | Confidence | 99.73% | Date | Thu Jan 5 12:21:36 GMT 2012 |
Rank | 166 | Aligned Residues | 109 |
% Identity | 15% | Template | c2b78A_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:hypothetical protein smu.776; |
PDBTitle: a putative sam-dependent methyltransferase from2 streptococcus mutans
|
Resolution | 2.00 Å |
|
 |
  |   |
122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | |
. | . | . | . | . | . | . | . | 180 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 190 | . | . | . | . | |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |
|
|  |  |  | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
T | G | R | T | I | L | D | V | G | C | G | S | G | Y | H | M | W | R | M | I | G | A | G | A | H | L | A | V | G | I | D | P | T | Q | L | F | L | C | Q | F | E | A | V | R | K | L | L | G | N | D | . |
Q | R | A | H | L | L | P | L | G | I | E | Q | . |
. |
. |
. |
. |
L | P | A | L | K | A | F | D | T | V | F | . |
Query Conservation |   |
  |
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . |   |   |   |   |   |   |
|
|   |
|   | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |
|   |   |
|
|
|
|
|   |
|
|
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
Template Sequence |   |
A | G | K | T | V | L | N | L | F | S | Y | T | A | A | F | S | V | A | A | A | M | G | G | A | M | A | T | T | S | V | D | L | A | K | R | S | R | A | L | S | L | A | H | F | E | A | N | H | L | D | M | A | N | H | Q | L | V | V | M | D | V | F | D | Y | F | K | Y | A | R | R | H | H | L | T | Y | D | I | I | I | I |
Template Known Secondary structure |   |
B | T |
|  |  |  |  |  | T |
| T | T | T |  |  |  |  |  |  |  |  | T | T | B | S |  |  |  |  |  |  | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| T | T |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
212 | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . |
  |
  |   |
|
|
|
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
Predicted Secondary structure |   |
. | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
S | M | G | V | L | Y | H | R | R | S | P | L | E | H | L | W | Q | L | K | D | Q | L | V | N | E | G | E | L | V | L | E | T | L | V | I | D |
Query Conservation |   |
. | . | . |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|   |
|   |   |   |
|   |
|   |   |
Template Sequence |   |
D | P | P | S | F | E | V | F | S | V | S | K | D | Y | H | K | L | I | R | Q | G | L | E | I | L | S | E | N | G | L | I | I | A | S | T | N | A | A | N |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
292 | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|