Return to main results Retrieve Phyre Job Id

Job DescriptionP00393
Confidence99.07%DateThu Jan 5 10:56:36 GMT 2012
Rank185Aligned Residues213
% Identity26%Templated3c96a1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  KIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVID
Query Conservation   






 


 

  
   
       




                
                   
      
  
Alig confidence 























....








































...







Template Conservation   
 




 


  
  
 
 
  .... 
 
 
        
    
       
   
         ...        
Template Sequence  DILIAGAGIGGLSCALALHQAGIG. . . . KVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATA. . . IPTHELRY
Template Known Secondary structure 

STT
S....SSSS



S

TT
S...
Template Predicted Secondary structure 






....













...




Template SS confidence 















































































   6...10.........20......... 30.........40.........50.........60.........70 ........
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  IDREAKTITIAELRDEKGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLG
Query Conservation 

     
                    

 



 
       
 
             
                   
Alig confidence 


















.............................................................
Template Conservation      
              .............................................................
Template Sequence  IDQSGATVWSEPRGVEAGN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
TTS

GGGGT
.............................................................
Template Predicted Secondary structure 













.............................................................
Template SS confidence 















































































   7980.........90.......
 
   167..170.........180.........190.........200.........210.........220.........230......... 240....
Predicted Secondary structure 


























..

Query SS confidence 








































































. .




Query Sequence  ANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKL. . GVRVL
Query Conservation        
 




  
 
 
  
                       

      
              
   ..

 
 
Alig confidence  ..................................................






















..




Template Conservation  ..................................................               
              
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AYPQYSIHRGELQMILLAAVRERLGQQAVR
Template Known Secondary structure  ..................................................SS

TTS
Template Predicted Secondary structure  ..................................................











Template SS confidence 















































































   98.100.........110.........120.......
 
   245....250..... ....260.. .......270.........280.........290.........300.........310......
Predicted Secondary structure 



....



....





























Query SS confidence 










. . . .






. . . .





















































Query Sequence  TQTMVTSADEG. . . . GLHTKDG. . . . EYIEADLMVWAAGIKAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDC
Query Conservation      
  
   ....     

....  
  
 

 
 
                  
 
 

  

      





 
Alig confidence 










....






....






























.......















Template Conservation                
      
        

 

 
 
  
 

        
   .......             


Template Sequence  TGLGVERIEERDGRVLIGARDGHGKPQALGADVLVGADGIHSAVRAHLHPDQRPLRD. . . . . . . PLPHWGRGRITLLGDA
Template Known Secondary structure  STTTTS
S


TT

TT





.......

S


BTT
T
Template Predicted Secondary structure 
























.......












Template SS confidence 















































































   128.130.........140.........150.........160.........170.........180.... .....190.........200
 
   317..320.........330.........340.......
Predicted Secondary structure 








Query SS confidence 






























Query Sequence  ASCPRPEGGFVPPRAQAAHQMATCAMNNILA
Query Conservation 
          
  
  
  

   
 

  
Alig confidence 









...

















Template Conservation 

   
  
 ...
   

 

  
   
  
Template Sequence  AHLMYPMGAN. . . GASQAILDGIELAAALAR
Template Known Secondary structure 


SSTT
...T
Template Predicted Secondary structure 






...



Template SS confidence 






























   312.......320. ........330.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions