Job Description P00393 Confidence 98.77% Date Thu Jan 5 10:56:36 GMT 2012 Rank 217 Aligned Residues 125 % Identity 11% Template d1rp0a1 SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Thi4-like Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	T	P	L	K	K	I	V	I	V	G	G	G	A	G	G	L	E	M	A	T	Q	L	G	H	K	L	G	R	K	K	K	A	K	I	T	L	V	D	R	N	H	S	H	L	W	K	P	L	L	H	E	V	A	T	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		I	T	Y	A	E	T	D	V	V	V	V	G	A	G	S	A	G	L	S	A	A	Y	E	I	S	K	N	.	.	.	.	P	N	V	Q	V	A	I	I	E	Q	S	V	S	P	G	G	G	A	W	L	G	G	Q	L	F	S	A	M	I	V	R	K	P	A	H	L	F	L	D	E	I	G	V	A	Y	D	E	Q	D
Template Known Secondary structure					T										S												T	S	.	.	.	.	T	T	S							S	S	S	S			T	T	T	T			S	T	T								T	T	T								T							S
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
								59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																										.													.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																										.													.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	L	D	E	G	V	D	A	L	S	Y	L	A	H	A	R	N	H	G	F	Q	F	Q	L	G	S	.	V	I	D	I	D	R	E	A	K	T	I	T	.	.	.	.	.	.	I	A	E	L	R	D	E	K	G	E	L	L	V	P	E	R	K	I	A	Y	D	T	L	V	M	A	L	G	S	T
Query Conservation		.	.	.	.	.	.																										.													.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																										.													.	.	.	.	.	.
Template Conservation
Template Sequence		T	Y	V	V	V	K	H	A	A	L	F	T	S	T	I	M	S	K	L	L	A	R	P	N	V	K	L	F	N	A	V	A	A	E	D	L	I	V	K	G	N	R	V	G	G	V	V	T	N	W	A	L	V	A	Q	N	H	H	T	Q	S	C	M	D	P	N	V	M	E	A	K	I	V	V	S	S	C	G	H	D
Template Known Secondary structure		S					S															T	S	T	T						T										T	T														T		T	T	T	S	S																		S	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		126	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	F	G
Template Known Secondary structure		S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions