Job Description P00393 Confidence 100.00% Date Thu Jan 5 10:56:36 GMT 2012 Rank 47 Aligned Residues 304 % Identity 20% Template c3o0hA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutathione reductase; PDBTitle: crystal structure of glutathione reductase from bartonella henselae Resolution 1.90 Å

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		4	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure					.																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	K	.	K	I	V	I	V	G	G	G	A	G	G	L	E	M	A	T	Q	L	G	H	K	L	G	R	K	K	K	A	K	I	T	L	V	D	R	N	H	S	H	L	W	K	P	L	L	H	E	V	A	T	G	S	L	D	E	G	V	D	A	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																							.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		S	F	D	F	D	L	F	V	I	G	S	G	S	G	G	V	R	A	A	R	L	A	G	A	L	G	.	.	.	.	.	K	R	V	A	I	A	E	E	Y	R	I	G	G	T	C	V	I	R	G	C	V	P	K	K	L	Y	F	Y	A	S	Q	Y	A	Q	E	F	S	K	S	I	G	F	G	W	K	Y	A	D	P
Template Known Secondary structure				S									S													T	T	.	.	.	.	.								S	S		T	T							S																					G	G	G	T
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
																							68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	A	H	A	R	N	H	G	F	Q	F	Q	L	G	S	V	I	D	I	D	R	E	A	K	T	I	T	I	A	E	L	R	D	E	K	G	E	L	L	V	P	E	R	K	I	A	Y	D	T	L	V	M	A	L	G	S	T	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	N	W	E	K	L	V	A	A	K	N	K	E	I	S	R	L	E	G	L	Y	R	E	G	L	Q	N	S	N	V	H	I	Y	E	S	R	A	V	F	V	D	E	H	T	L	E	L	.	.	.	.	.	.	.	.	.	.	.	.	S	V	T	G	E	R	I	S	A	E	K	I	L	I	A	T	G	A	K	I
Template Known Secondary structure																														T	T						S							T	T					.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.													.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	F	N	T	P	G	V	K	E	N	C	I	F	L	D	N	P	H	Q	A	R	R	F	H	Q	E	M	L	N	L	F	L	K	Y	S	A	N	L	G	A	N	G	K	V	N	I	A	I	V	G	G	G	A	T	G	V	E	L	S	A	E	L	H	N	A	V	K	Q	L	H	S	Y	G	Y	K	G	L	T	N
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	N	I	K	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	C	L	T	S	N	E	I	F	D	L	E	K	L	P	K	S	I	V	I	V	G	G	G	Y	I	G	V	E	F	A	N	I	F	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						B	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S	B		T	T	T	G	G	G		S	S			S								S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.																						.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.					.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		E	A	L	N	V	T	L	V	E	A	G	E	R	I	L	P	A	L	P	P	R	I	S	A	A	A	H	N	E	L	T	K	L	G	V	R	V	L	T	Q	T	M	V	T	S	A	D	E	G	.	.	.	.	G	L	H	T	K	D	G	E	Y	I	E	A	D	L	M	V	W	A	A	G	I	K	A	P	D	F	L
Query Conservation																																																			.	.	.	.
Alig confidence																																																			.	.	.	.
Template Conservation
Template Sequence		L	G	V	K	T	T	L	L	H	R	G	D	L	I	L	R	N	F	D	Y	D	L	R	Q	L	L	N	D	A	M	V	A	K	G	I	S	I	I	Y	E	A	T	V	S	Q	V	Q	S	T	E	N	C	Y	N	V	V	L	T	N	G	Q	T	I	C	A	D	R	V	M	L	A	T	G	R	V	P	N	T	T	G
Template Known Secondary structure		T	T								S	S	S	S	S	S	T	T	S																T					S	S										S	S	S						T	T	S						S													T	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		283	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		K	D	I	G	G	.	.	L	E	T	N	R	I	N	Q	L	V	V	E	P	T	L	Q	T	T	R	D	P	D	I	Y	A	I	G	D	C	A	S	C	P	R	P	E	G	G	F	V	P	P	R	A	Q	A	A	H	Q	M	A	T	C	A	M	N	N	I	L	A	Q	M	N	G	K	P	L	K	N	Y	Q	Y	K
Query Conservation							.	.
Alig confidence							.	.																		.														.	.	.	.	.	.	.	.
Template Conservation																										.														.	.	.	.	.	.	.	.
Template Sequence		L	G	L	E	R	A	G	V	K	V	N	E	F	G	A	V	V	V	D	E	K	M	T	T	.	N	V	S	H	I	W	A	V	G	D	V	T	G	.	.	.	.	.	.	.	.	H	I	Q	L	T	P	V	A	I	H	D	A	M	C	F	V	K	N	A	F	E	T	T	P	D	Y	D	L	I	T	T	A	V	F
Template Known Secondary structure								T			B		T	T	S		B				T	T	S	B		.	S	S	T	T					G	G	G	G	T	.	.	.	.	.	.	.	.	S																										T	T
Template Predicted Secondary structure																										.														.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.									.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		361	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	G	S	L	V	S	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	P	E	I	G	T	V	G
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions