Job Description P00393 Confidence 99.22% Date Thu Jan 5 10:56:36 GMT 2012 Rank 163 Aligned Residues 223 % Identity 18% Template c3nrnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pf1083; PDBTitle: crystal structure of pf1083 protein from pyrococcus furiosus,2 northeast structural genomics consortium target pfr223 Resolution 2.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.								.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.
Query Sequence		K	K	I	V	I	V	G	G	G	A	G	G	L	E	M	A	T	Q	L	G	H	K	L	G	R	K	K	K	A	K	I	T	L	V	D	R	N	H	S	H	L	W	K	P	L	L	H	E	V	A	T	G	S	L	D	E	.	.	.	.	.	.	.	G	V	D	A	L	S	Y	L	A	H	A	R	N	H	G	F	Q
Query Conservation																																																										.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		X	R	A	V	V	V	G	A	G	L	G	G	L	L	A	G	A	F	L	A	R	N	G	.	.	.	.	.	H	E	I	I	V	L	E	K	S	A	X	I	G	G	R	F	T	N	L	P	Y	K	G	F	Q	L	S	T	G	A	L	H	X	I	P	H	G	E	D	G	P	L	A	H	L	L	R	I	L	G	A	K
Template Known Secondary structure								S		S													T	T	.	.	.	.	.								S	S	S	S	S		T	T	S	S					T	T					S	S	S		S			T	T	T	T	S	S										T
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.						.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	L	G	S	V	I	D	I	D	R	E	A	K	T	I	T	I	A	E	L	R	D	E	K	G	E	L	L	V	P	E	R	K	I	A	Y	D	T	L	V	M	A	L	G	S	T	S	N	D	F	N	T	P	G	V	K	E	N	C	I	F	L	D	N	P	H	Q	A	R	R	F	H	Q	E	M	L	N	L	F
Query Conservation
Alig confidence		.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	V	E	I	V	N	S	N	P	K	G	K	I	.	.	.	.	.	.	.	.	.	.	.	L	W	E	G	K	I	F	H	Y	R	E	S	W	K	F	L	S	K	L	L	A	E	I	R	X	N	K	L	P	K	E	E	I	P	A	D	E	W	I	K	E	K	I	G	E	N	E	F	L	L	S	V
Template Known Secondary structure		.	.	.	.	.							S	S	S				.	.	.	.	.	.	.	.	.	.	.			T	T					G	G	G	G	G	G	G										T	T							S	B									T
Template Predicted Secondary structure		.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							76	.	.	.	80	.	.	.	.	.	.	.												.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	Y	S	A	N	L	G	A	N	G	K	V	N	I	A	I	V	G	G	G	A	T	G	V	E	L	S	A	E	L	H	N	A	V	K	Q	L	H	S	Y	G	Y	K	G	L	T	N	E	A	L	N	V	T	L	V	E	A	G	E	R	I	L	P	A	L	P	P	R	I	S	A	A	A	H	N	E	L	T	K
Query Conservation
Alig confidence																		.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	S	F	A	G	W	A	D	S	V	S	L	S	D	L	.	.	.	.	.	.	T	A	L	E	L	A	K	E	I	R	A	A	L	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	P	G	L	I	R	G	G	C	K	A	V	I	D	E	L	E	R	I	I	X	E
Template Known Secondary structure											S	S		G	G	G	S	.	.	.	.	.	.	B															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S					T	T															T
Template Predicted Secondary structure																		.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.	.	.	.	.	.	170	.	.	.	.	.	.	.	.																					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		L	G	V	R	V	L	T	Q	T	M	V	T	S	A	.	.	D	E	G	G	L	H	T	K	D	G	E	Y	I	E	A	D	L	M	V	W	A	A	G
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		N	K	G	K	I	L	T	R	K	E	V	V	E	I	N	I	E	E	K	K	V	Y	T	R	D	N	E	E	Y	S	F	D	V	A	I	S	N	V	G
Template Known Secondary structure		T	T					S	S								T	T	T	T					T	T							S						S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions