Job Description P00393 Confidence 100.00% Date Thu Jan 5 10:56:36 GMT 2012 Rank 8 Aligned Residues 304 % Identity 27% Template c3kd9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:coenzyme a disulfide reductase; PDBTitle: crystal structure of pyridine nucleotide disulfide oxidoreductase from2 pyrococcus horikoshii Resolution 2.75 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		P	L	K	K	I	V	I	V	G	G	G	A	G	G	L	E	M	A	T	Q	L	G	H	K	L	G	R	K	K	K	A	K	I	T	L	V	D	R	N	H	S	H	L	W	K	P	L	L	H	E	V	A	T	G	S	L	D	E	G	V	D	A	L	S	Y	L	A	H	A	R	N	H	G	F	Q	F	.	Q	L	G
Query Conservation																																																																														.
Alig confidence																										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	K	K	V	V	I	I	G	G	G	A	A	G	M	S	A	A	S	R	V	K	R	L	.	.	.	K	P	E	W	D	V	K	V	F	E	A	T	E	W	V	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	K	K	R	G	I	D	L	H	L	N	A
Template Known Secondary structure												S														.	.	.		T	T	S							S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					T						T
Template Predicted Secondary structure																										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																							.	.	.	.	.	.	50	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		S	V	I	D	I	D	R	E	A	K	T	I	T	I	A	E	L	R	D	E	K	G	E	L	L	V	P	E	R	K	I	A	Y	D	T	L	V	M	A	L	G	S	T	S	N	D	F	N	T	P	G	V	K	.	E	N	C	I	F	L	D	N	P	H	Q	A	R	R	F	H	Q	E	M	L	N	L	F	L	K	Y
Query Conservation																																																							.
Alig confidence															.	.	.	.	.	.	.	.	.	.																															.																							.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template Sequence		E	V	I	E	V	D	T	G	Y	V	R	V	R	.	.	.	.	.	.	.	.	.	.	E	N	G	G	E	K	S	Y	E	W	D	Y	L	V	F	A	N	G	A	S	P	Q	V	P	A	I	E	G	V	N	L	K	G	V	F	T	A	D	L	P	P	D	A	L	A	I	R	E	Y	M	E	K	Y	.	.	.	.
Template Known Secondary structure								T	T						.	.	.	.	.	.	.	.	.	.		T	T								S															S	B				S	T	T				S		S												T	T	S	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.											.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	N	L	G	A	N	G	K	V	N	I	A	I	V	G	G	G	A	T	G	V	E	L	S	A	E	L	H	N	A	V	K	Q	L	H	S	Y	G	Y	K	G	L	T	N	E	A	L	N	V	T	L	V	E	A	G	E	R	I	L	P	A	L	P	P	R	I	S	A	A	A	H	N	E	L	T	K	L	G	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	V	E	N	V	V	I	I	G	G	G	Y	I	G	I	E	M	A	E	A	F	A	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	N	V	T	M	I	V	R	G	E	R	V	L	R	R	S	F	D	K	E	V	T	D	I	L	E	E	K	L	K	K	H	V
Template Known Secondary structure		.	.	.	.	.	.	.											S												T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S	S	S	S	T	T	T	T	T	S													T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
									147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170																.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		R	V	L	T	Q	T	M	V	T	S	A	D	E	G	.	.	.	G	L	H	T	K	D	G	E	Y	I	E	A	D	L	M	V	W	A	A	G	I	K	A	P	D	F	L	K	D	I	G	G	L	E	T	N	R	I	N	Q	L	V	V	E	P	T	L	Q	T	T	R	D	P	D	I	Y	A	I	G	D	C	A	S
Query Conservation																.	.	.
Alig confidence																.	.	.																																																		.
Template Conservation																																																																				.
Template Sequence		N	L	R	L	Q	E	I	T	M	K	I	E	G	E	E	R	V	E	K	V	V	T	D	A	G	E	Y	K	A	E	L	V	I	L	A	T	G	I	K	P	N	I	E	L	A	K	Q	L	G	V	R	I	G	E	T	G	A	I	W	T	N	E	K	M	Q	T	.	S	V	E	N	V	Y	A	A	G	D	V	A	E
Template Known Secondary structure						S								B	S	S	S	B						T	T						S						S											T	T	T			B		T	T	S	S	B				T	T		B		.	S	S	T	T					G	G	G	B
Template Predicted Secondary structure																																																																				.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.
		319	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		C	P	R	P	E	G	G	.	.	F	V	P	P	R	A	Q	A	A	H	Q	M	A	T	C	A	M	N	N	I	L	A	Q	M	N	G	K	P	L	K	N	Y	Q	Y	K	D	H	G	S	L	V	S	L	S	N	F	S	T
Query Conservation									.	.
Alig confidence									.	.																						.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		T	R	H	V	I	T	G	R	R	V	W	V	P	L	A	P	A	G	N	K	M	G	Y	V	A	G	S	N	I	A	.	.	.	.	G	K	E	L	H	F	P	G	V	L	G	T	A	V	T	K	F	M	D	V	E	I	G
Template Known Secondary structure				B	T	T	T		S																						T	.	.	.	.	T								B									T	T
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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