Job Description P00393 Confidence 100.00% Date Thu Jan 5 10:56:36 GMT 2012 Rank 45 Aligned Residues 292 % Identity 16% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		T	T	P	L	K	K	I	V	I	V	G	G	G	A	G	G	L	E	M	A	T	Q	L	G	H	K	L	G	R	K	K	K	A	K	I	T	L	V	D	R	N	H	S	H	L	W	K	P	L	L	H	E	V	A	T	G	S	L	D	E	G	V	D	A	L	S	Y	L	A	H	A	R	N	H	.	G	F	Q	F	Q
Query Conservation																																																																												.
Alig confidence																														.	.	.	.	.																																										.
Template Conservation																														.	.	.	.	.
Template Sequence		K	E	S	D	A	R	V	L	V	V	G	A	G	P	S	G	L	E	A	A	R	A	L	G	V	R	G	Y	.	.	.	.	.	D	V	V	L	A	E	A	G	R	D	L	G	G	R	V	T	Q	E	S	A	L	P	G	L	S	A	W	G	R	V	K	E	Y	R	E	A	V	L	A	E	L	P	N	V	E	I	Y
Template Known Secondary structure			S	S										S														T		.	.	.	.	.							S	S	S	S	S		T							T	S	T	T		G	G	G	G												T		T	T
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.						.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	S	V	I	D	I	D	R	E	A	K	T	I	T	I	A	E	L	R	D	E	K	G	E	L	L	V	P	E	R	K	I	A	Y	D	T	L	V	M	A	L	G	S	T	S	N	D	F	N	T	P	G	V	K	E	N	C	I	F	L	D	N	P	H	Q	A	R	R	F	H	Q	E	M	L	N	L	F	L	K
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Template Sequence		R	E	S	P	M	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	D	I	V	E	F	G	F	E	H	V	I	T	A	T	G	A	T	W	R	T	D	G	V	A	R	F	H	T	T	A	L	P	I	A	E	G	M	Q	V	L	G	P	D	D	L	F	.	.	.	.	.	.
Template Known Secondary structure		S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T														S	S			S	S	S		S	S				B		T	T	S										.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Template SS confidence
		463	.	.	.	.	.																					.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.																																															.
Query SS confidence																				.	.																																															.
Query Sequence		Y	S	A	N	L	G	A	N	G	K	V	N	I	A	I	V	G	G	.	.	G	A	T	G	V	E	L	S	A	E	L	H	N	A	V	K	Q	L	H	S	Y	G	Y	K	G	L	T	N	E	A	L	N	V	T	L	V	E	A	G	E	R	I	L	P	A	L	.	P	P	R	I	S	A	A	A	H	N	E	L	T
Query Conservation																				.	.																																															.
Alig confidence		.	.	.																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation		.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	A	G	R	L	P	D	G	K	K	V	V	V	Y	D	D	D	H	Y	Y	L	G	G	V	V	A	E	L	L	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	Y	E	V	S	I	V	T	P	G	A	Q	V	S	S	W	T	N	N	T	F	E	V	N	R	I	Q	R	R	L	I
Template Known Secondary structure		.	.	.		T				S	S	S								S		S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								S	S	S	S	T	T	G	G	G	G	T	T	T
Template Predicted Secondary structure		.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.																.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		K	L	G	V	R	V	L	T	Q	T	M	V	T	S	A	D	E	G	G	L	H	T	.	.	.	.	.	K	D	G	E	Y	I	E	A	D	L	M	V	W	A	A	G	I	K	A	P	D	F	L	K	D	I	G	G	L	E	T	N	R	I	N	Q	L	V	V	E	P	T	L	Q	T	T	R	D	P	D	I	Y	A
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	N	G	V	A	R	V	T	D	H	A	V	V	A	V	G	A	G	G	V	T	V	R	D	T	Y	A	S	I	E	R	E	L	E	C	D	A	V	V	M	V	T	A	R	L	P	R	E	E	L	Y	L	D	L	V	A	R	R	D	A	.	.	.	.	.	.	.	.	.	.	.	.	G	E	I	A	S	V	R	G
Template Known Secondary structure			T	T						S								T	T							T	T	T									S																							T	T	.	.	.	.	.	.	.	.	.	.	.	.	T	S		S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.													.	640	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	D	C	A	S	C	P	R	P	E	G	G	F	V	P	P	R	A	Q	A	A	H	Q	M	A	T	C	A	M	N	N	I	L	A	Q	M	N	G	K	P	L	K	N	Y	Q	Y	K	D	H	G
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.
Template Sequence		I	G	D	A	W	A	.	.	.	.	.	.	.	.	.	P	G	T	I	A	A	A	V	W	S	G	R	R	A	A	E	E	F	D	A	V	L	P	S	N	D	E	V	P	F	R	R	E	V	T	Q
Template Known Secondary structure			G	G	G	T	S	.	.	.	.	.	.	.	.	.																		T	T						T	T	S		S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Template SS confidence
		647	.	.	650	.	.										.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions