Job Description P00393 Confidence 100.00% Date Thu Jan 5 10:56:36 GMT 2012 Rank 1 Aligned Residues 387 % Identity 18% Template c3hyxC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:sulfide-quinone reductase; PDBTitle: 3-d x-ray structure of the sulfide:quinone oxidoreductase from aquifex2 aeolicus in complex with aurachin c Resolution 2.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	I	V	I	V	G	G	G	A	G	G	L	E	M	A	T	Q	L	G	H	K	L	G	R	K	K	K	A	K	I	T	L	V	D	R	N	H	S	H	L	W	K	P	L	L	H	E	V	A	T	G	S	L	D	E	G	V	D	A	L	S	Y	L	A	H	A	R	N	H	G	F	Q	F	Q	L	G	S	V	I
Query Conservation
Alig confidence																									.	.	.
Template Conservation																									.	.	.
Template Sequence		K	H	V	V	V	I	G	G	G	V	G	G	I	A	T	A	Y	N	L	R	N	L	M	.	.	.	P	D	L	K	I	T	L	I	S	D	R	P	Y	F	G	F	T	P	A	F	P	H	L	A	M	G	W	R	K	F	E	D	I	S	V	P	L	A	P	L	L	P	K	F	N	I	E	F	I	N	E	K	A	E
Template Known Secondary structure									S	S															.	.	.	T	T								S	S	S					G	G	G							T		S		G	G	G	G				S	T	T	T	G	G	G	G	T						S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	D	R	E	A	K	T	I	T	I	A	E	L	R	D	E	K	G	E	L	L	V	P	E	R	K	I	A	Y	D	T	L	V	M	A	L	G	S	T	S	N	D	F	N	T	P	G	V	K	E	N	C	I	F	L	D	N	P	H	Q	A	R	R	F	H	Q	E	M	L	N	L	F	L	K	Y	S	A	N	L
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																							.																														.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.																							.																														.	.	.	.	.	.	.
Template Sequence		S	I	D	P	D	A	N	T	V	T	.	.	.	.	.	.	.	.	.	.	.	T	Q	S	G	K	K	I	E	Y	D	Y	L	V	I	A	T	G	P	K	L	V	F	.	G	A	E	G	Q	E	E	N	S	T	S	I	C	T	A	E	H	A	L	E	T	Q	K	K	L	Q	E	L	Y	.	.	.	.	.	.	.
Template Known Secondary structure					T	T	T	T				.	.	.	.	.	.	.	.	.	.	.		T	T							S													.		S	B	T						B			S	S																.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																							.																														.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.												90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		G	A	N	G	K	V	N	I	A	I	V	G	G	G	A	T	G	V	E	L	S	A	E	L	H	N	A	V	K	Q	L	H	S	Y	G	Y	K	G	L	T	N	E	A	L	N	V	T	L	V	E	A	G	E	R	I	L	P	.	.	.	A	L	P	P	R	I	S	A	A	A	H	N	E	L	T	K	L	G	V	R
Query Conservation																																																											.	.	.
Alig confidence		.	.	.	.																			.																																			.	.	.
Template Conservation		.	.	.	.																			.
Template Sequence		.	.	.	.	A	N	P	G	P	V	V	I	G	A	I	P	G	V	S	F	G	P	.	A	Y	E	F	A	L	M	L	H	Y	E	L	K	K	R	G	I	R	Y	K	V	P	M	T	F	I	T	S	E	P	Y	L	G	H	F	G	V	G	G	I	G	A	S	K	R	L	V	E	D	L	F	A	E	R	N	I	D
Template Known Secondary structure		.	.	.	.		S										T	T						.															T	T		G	G	G								S	S	S	S	T	T		T	T	T	T		S	T	T												T	T
Template Predicted Secondary structure		.	.	.	.																			.
Template SS confidence
						141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260					.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.																												.
Query SS confidence																				.	.	.	.																												.
Query Sequence		V	L	T	Q	T	M	V	T	S	A	D	E	G	G	L	H	T	K	.	.	.	.	D	G	E	Y	I	E	A	D	L	M	V	W	A	A	G	I	K	A	P	D	F	L	K	D	I	G	G	.	L	E	T	N	R	I	N	Q	L	V	V	E	P	T	L	Q	T	T	R	D	P	D	I	Y	A	I	G	D	C	A
Query Conservation																				.	.	.	.																												.
Alig confidence																				.	.	.	.																												.
Template Conservation
Template Sequence		W	I	A	N	V	A	V	K	A	I	E	P	D	K	V	I	Y	E	D	L	N	G	N	T	H	E	V	P	A	K	F	T	M	F	M	P	S	F	Q	G	P	E	V	V	A	S	A	G	D	K	V	A	N	P	A	N	K	M	V	I	V	N	R	C	F	Q	N	P	T	Y	K	N	I	F	G	V	G	V	V	T
Template Known Secondary structure					S								S	S							T	T	S								S																	S		T	T	T	B		T	T	T			B				T	T	S	B		S	S		T	T					S	T	T	B
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.
Predicted Secondary structure											.	.	.	.																																																																.	.
Query SS confidence											.	.	.	.																																																																.	.
Query Sequence		S	C	P	R	P	E	G	G	F	.	.	.	.	V	P	P	R	A	Q	A	A	H	Q	M	A	T	C	A	M	N	N	I	L	A	Q	M	N	G	K	P	L	K	N	Y	Q	Y	K	D	H	G	S	L	V	S	L	S	N	F	S	T	V	G	S	L	M	G	N	L	T	R	G	S	M	M	I	E	.	.	G	R
Query Conservation											.	.	.	.																																																																.	.
Alig confidence											.	.	.	.																																																																.	.
Template Conservation
Template Sequence		A	I	P	P	I	E	K	T	P	I	P	T	G	V	P	K	T	G	M	M	I	E	Q	M	A	M	A	V	A	H	N	I	V	N	D	I	R	N	N	P	D	K	Y	A	P	R	L	S	A	I	C	I	A	D	F	G	E	D	A	G	F	F	F	A	D	P	V	I	P	P	R	E	R	V	I	T	K	M	G	K
Template Known Secondary structure						S	S			S	S																											T	T																		S	S	S								S	S	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		392	.										.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.
Query Sequence		I	A	.	.	.	.	.	.	.	.	.	R	F	V	Y	I	S	L	Y	R	M	H	Q	I	A	L	H	G	Y	F	K	T	G	L	M	M	L
Query Conservation				.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	A	H	Y	F	K	T	A	F	E	K	Y	F	L	W	K	V	R	N	G	N	I	A	P	S	F	E	E	K	V	L	E	I	F	L	K	V
Template Known Secondary structure																				T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.