Job Description P00393 Confidence 98.96% Date Thu Jan 5 10:56:36 GMT 2012 Rank 196 Aligned Residues 74 % Identity 20% Template c2v1dA_ PDB info PDB header:oxidoreductase/repressor Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: structural basis of lsd1-corest selectivity in histone h32 recognition Resolution 3.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.
Query Sequence		T	T	P	L	K	K	I	V	I	V	G	G	G	A	G	G	L	E	M	A	T	Q	L	G	H	K	L	G	R	K	K	K	A	K	I	T	L	V	D	R	N	H	S	H	L	W	K	P	L	L	H	E	V	A	T	G	S	L	D	E	G	V	D	A	L	S	.	.	.	.	.	.	Y	L	A	H	A	R	N	H
Query Conservation																																																																				.	.	.	.	.	.
Alig confidence																													.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		T	K	K	T	G	K	V	I	I	I	G	S	G	V	S	G	L	A	A	A	R	Q	L	Q	S	F	G	.	.	.	.	.	M	D	V	T	L	L	E	A	R	D	R	V	G	G	R	V	A	T	F	R	K	G	N	Y	V	A	D	L	G	A	M	V	V	T	G	L	G	G	N	P	M	A	V	V	S	K	Q	V
Template Known Secondary structure		S	S			S								S													T	T	.	.	.	.	.								S	S	S	S	S		T	T							T	T					S	S							S	B	T										T
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		76	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	Q	F	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	M	E	L	A
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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