Job Description P00393 Confidence 97.08% Date Thu Jan 5 10:56:36 GMT 2012 Rank 310 Aligned Residues 127 % Identity 15% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		T	T	P	L	K	K	I	V	I	V	G	G	G	A	G	G	L	E	M	.	A	T	Q	L	G	H	K	L	G	R	K	K	K	A	K	I	T	L	V	D	R	N	H	S	H	L	W	K	P	L	L	H	E	V	A	T	G	S	L	D	E	G	V	D	A	L	S	Y	L	A	H	A	R	N	H	G	F	Q	F	Q
Query Conservation																					.
Alig confidence																					.									.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	R	R	V	R	H	I	H	F	V	G	I	G	G	A	G	X	G	G	I	A	E	V	L	A	N	E	G	.	.	.	.	.	Y	Q	I	S	G	S	D	L	A	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	T	Q	Q	L	X	N	L	G	A	T	I	Y
Template Known Secondary structure			T	T								T	T	T	S	T	T											T	T	.	.	.	.	.								S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T
Template Predicted Secondary structure																														.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.																							.	.	.	.	.	60	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	S	V	I	D	I	D	R	E	A	K	T	I	T	I	A	E	L	R	D	E	K	G	E	L	L	V	P	E	R	K	I	A	Y	D	T	L	V	M	A	L	G	S	T	S	N	D	F	N	T	P	G	V	K	E	N	C	I	F	L	D	N	P	H	Q	A	R	R	F	H	Q	E	M	L	N	L	F	L	K
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Template Sequence		F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	P	E	N	V	R	D	A	S	V	V	V	V	S	S	A	I	S	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	V	I	R	R	A	E	X	L	A	E	L	X	R	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	G	T	T		S						T	T			T	T										T	T															T	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Template SS confidence
		69	70																									.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	A	N	L	G	A	N	G	K	V	N	I	A	I	V	G	G	G	A	T	G	V	E	L	S	A	E	L	H	N	A	V	K	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	F	R	H	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	X	V	S	S	I	Y	A	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	T	S							S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions