Job Description P00393 Confidence 99.34% Date Thu Jan 5 10:56:36 GMT 2012 Rank 146 Aligned Residues 254 % Identity 12% Template c2b9yA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative aminooxidase; PDBTitle: crystal structure of cla-producing fatty acid isomerase2 from p. acnes Resolution 2.21 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		M	T	T	P	L	K	K	I	V	I	V	G	G	G	A	G	G	L	E	M	A	T	Q	L	G	H	K	L	G	R	K	K	K	A	K	I	T	L	V	D	R	N	H	S	H	L	W	K	P	L	L	H	E	V	A	T	G	S	L	D	E	G	V	D	A	L	S	.	.	.	.	.	Y	L	A	H	A	R	N	H
Query Conservation																																																																					.	.	.	.	.
Alig confidence						.																										.	.	.	.																																		.	.	.	.	.
Template Conservation						.																										.	.	.	.
Template Sequence		I	S	K	D	.	S	R	I	A	I	I	G	A	G	P	A	G	L	A	A	G	M	Y	L	E	Q	A	G	F	H	.	.	.	.	D	Y	T	I	L	E	R	T	D	H	V	G	G	K	C	H	S	P	N	Y	H	G	R	R	Y	E	M	G	A	I	M	G	V	P	S	Y	D	T	I	Q	E	I	M	D	R	T
Template Known Secondary structure				T	T	.									S													T	T			.	.	.	.							S	S	S		S	S	T	T							T	T					S	S						T	T
Template Predicted Secondary structure						.																										.	.	.	.
Template SS confidence
		3	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		G	F	Q	F	Q	L	G	S	.	.	V	I	D	I	D	R	E	A	K	T	I	T	I	A	E	L	R	D	E	K	G	E	L	L	V	P	E	R	K	I	A	Y	D	T	L	V	M	A	L	G	S	T	S	N	D	F	N	T	P	G	V	K	E	N	C	I	F	L	D	N	P	H	Q	A	R	R	F	H	Q	E
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		G	D	K	V	D	G	P	K	L	R	R	E	F	L	H	E	D	G	E	I	Y	V	P	E	K	D	P	V	R	G	P	Q	V	M	A	A	V	Q	K	L	G	Q	L	L	A	T	K	Y	Q	G	Y	D	A	N	G	H	Y	N	K	V	H	E	D	L	M	L	P	F	D	E	F	L	A	L	N	G	C	E	A	A
Template Known Secondary structure																	T	T	S					G	G	G		T	T																		T	T	T	T	T	T	T	S	S	S	S	S	S				G	G	G	G	S	B								T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	N	L	F	L	K	Y	S	A	N	L	G	A	N	G	K	V	N	I	A	I	V	G	G	G	A	T	G	V	E	L	S	A	E	L	H	N	A	V	K	Q	L	H	S	Y	G	Y	K	G	L	T	N	E	A	L	N	V	T	L	V	E	A	G	E	R	I	L	P	A	L	P	P	R	I	S	A	A	A	H
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	D	L	W	I	N	P	F	T	A	F	G	Y	G	H	F	D	N	V	P	A	A	Y	V	L	K	Y	L	D	F	V	T	M	M	S	F	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	L	W	T	W	A	D	G	T	Q	A	M	F	E
Template Known Secondary structure							T	T	T								T	T	T	S	B								S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T						T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																												.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		N	E	L	T	K	L	G	V	R	V	L	T	Q	T	M	V	T	S	A	D	E	G	G	.	.	.	L	H	T	K	D	G	E	Y	I	E	A	D	L	M	V	W	A	A	G	I	K	A	P	D	F	L	K	D	I	G
Query Conservation																									.	.	.
Alig confidence																									.	.	.
Template Conservation
Template Sequence		H	L	N	A	T	L	E	H	P	A	E	R	N	V	D	I	T	R	I	T	R	E	D	G	K	V	H	I	H	T	T	D	W	D	R	E	S	D	V	L	V	L	T	V	P	L	E	K	F	L	D	Y	S	D	A	D
Template Known Secondary structure							S	S	S			B		S										T	T							S	S						S						S						G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions