Job Description P00393 Confidence 99.96% Date Thu Jan 5 10:56:36 GMT 2012 Rank 70 Aligned Residues 292 % Identity 15% Template c2a87A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of m. tuberculosis thioredoxin reductase Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		T	T	P	L	K	K	I	V	I	V	G	G	G	A	G	G	L	E	M	A	T	Q	L	G	H	K	L	G	R	K	K	K	A	K	I	T	L	V	D	R	N	H	S	H	L	W	K	P	L	L	H	E	V	.	.	.	.	.	A	T	G	S	L	D	E	G	V	D	A	L	S	Y	L	A	H	A	R	N	H	G
Query Conservation																																																							.	.	.	.	.
Alig confidence																													.	.	.	.	.																						.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		H	H	P	V	R	D	V	I	V	I	G	S	G	P	A	G	Y	T	A	A	L	Y	A	A	R	A	Q	.	.	.	.	.	L	A	P	L	V	F	E	G	T	S	F	G	G	A	L	M	T	T	T	D	V	E	N	Y	P	G	F	R	N	G	I	T	G	P	E	L	M	D	E	M	R	E	Q	A	L	R	F	G
Template Known Secondary structure																											T	T	.	.	.	.	.									S	S		S		G	G	G	S		S		B			S	T	T		T	T		B																T	T
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	F	Q	L	G	S	V	I	D	I	D	R	E	A	K	T	I	T	I	A	E	L	R	D	E	K	G	E	L	L	V	P	E	R	K	I	A	Y	D	T	L	V	M	A	L	G	S	T	S	N	D	F	N	T	P	G	V	K	E	N	C	I	F	L	D	N	P	H	Q	A	R	R	F	H	Q	E	M	L	N
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	L	R	M	E	D	V	E	S	V	S	L	H	G	P	L	K	S	V	.	.	.	.	.	.	.	.	.	V	T	A	D	G	Q	T	H	R	A	R	A	V	I	L	A	M	G	A	A	A	R	Y	L	Q	V	P	G	E	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	G	R	G
Template Known Secondary structure															S	S	S	S				.	.	.	.	.	.	.	.	.			T	T	S																						T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B	T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.										.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																.	.	.	140	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	L	K	Y	S	A	N	L	G	A	N	G	K	V	N	I	A	I	V	G	G	G	A	T	G	V	E	L	S	A	E	L	H	N	A	V	K	Q	L	H	S	Y	G	Y	K	G	L	T	N	E	A	L	N	V	T	L	V	E	A	G	E	R	I	L	P	A	L	P	P	R	I	S	A	A	A	H	N	E	L
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		V	S	S	C	A	T	C	D	G	F	F	F	R	D	Q	D	I	A	V	I	G	G	G	D	S	A	M	E	E	A	T	F	L	T	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	S	V	T	L	V	H	R	R	D	E	F	R	A	S	K	I	M	L	.	.	.	.	.	D	R	A	R
Template Known Secondary structure				S						G	G	G	G	T	T								S	S											T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S							S	S	S	S		S	S		T	T			.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.																.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.										.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence		T	K	L	G	V	R	V	L	T	Q	T	M	V	T	S	A	D	E	G	G	L	H	.	.	.	.	.	.	.	.	.	T	K	D	G	E	Y	I	E	A	D	L	M	V	W	A	A	G	I	K	A	P	D	F	L	K	D	I	G	G	L	E	T	N	R	I	N	Q	L	V	V	E	P	T	L	Q	T	T	R	D
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																													.
Template Conservation																																																													.
Template Sequence		N	N	D	K	I	R	F	L	T	N	H	T	V	V	A	V	D	G	D	T	T	V	T	G	L	R	V	R	D	T	N	T	G	A	E	T	T	L	P	V	T	G	V	F	V	A	I	G	H	E	P	R	S	G	L	V	R	E	A	.	I	D	V	D	P	D	G	Y	V	L	V	Q	G	R	T	T	S	T	S	L
Template Known Secondary structure				T	T						S									S	S	S										T	T	S								S						S							T	T	T	B	T	T	.	B		B		T	T	S		B			S	T	T	S	S	B		S	S
Template Predicted Secondary structure																																																													.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	I	Y	A	I	G	D	C	A	S	C	P	R	P	E	G	G	F	V	P	P	R	A	Q	A	A	H	Q	M	A	T	C	A	M	N	N	I	L	A	Q	M	N
Query Conservation
Alig confidence																	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		P	G	V	F	A	A	G	D	L	V	D	R	T	Y	R	.	.	.	.	.	.	.	Q	A	V	T	A	A	G	S	G	C	A	A	A	I	D	A	E	R	W	L	A
Template Known Secondary structure		T	T					G	G	G	T			S			.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.								.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions