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Job DescriptionP00393
Confidence99.92%DateThu Jan 5 10:56:36 GMT 2012
Rank84Aligned Residues262
% Identity19%Templatec1y56A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:hypothetical protein ph1363; PDBTitle: crystal structure of l-proline dehydrogenase from p.horikoshii
Resolution2.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  KIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHSHLWKPLLHEV. ATGSLDEGVDALSYLAHARNHGFQFQLGS. V
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Template Sequence  DVAIIGGGPAGIGAALELQQYL. . . . . . TVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLNENTKIYLETSA
Template Known Secondary structure  S



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   108.110.........120......... 130.........140.........150.........160.........170.........180.
 
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Query Sequence  IDIDREAKTITIAELRDEKGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSAN
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Template Sequence  LGVFDKGEYFLVPVVRGDKLIE. . . . . . ILAKRVVLATGAIDSTMLFENNDMPGVFR. . . . . . . . . . . . . RDFALEVMNV
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   182.......190.........200... ......210.........220.........230.. .......240..
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  LGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLGVRVL
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Template Sequence  WEVAPGRKVAVTGSKADEVIQE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LERWGIDYV
Template Known Secondary structure  S
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   243......250.........260.... .....270...
 
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Query Sequence  TQTMVTSADEG. . . . GLHTKDGEYIEADLMVWAAGIKAPDFLKDIGGLET. . NRINQLVVEPTLQTTRDPDIYAIGDCAS
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Template Sequence  HIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHRI. KDGIYVAGSAVS
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   274.....280.........290.........300.........310.........320.........330.........340 .........350..
 
   319320.........330.........340.........350..
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Query Sequence  CPRPEGGFVPPRAQAAHQMATCAMNNILAQMNGK
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Template Sequence  IK. . . . . . . . . PHYANYLEGKLVGAYILKEFGYD
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   353. .....360.........370.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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