Job Description P00393 Confidence 99.96% Date Thu Jan 5 10:56:36 GMT 2012 Rank 68 Aligned Residues 308 % Identity 17% Template c1lqtB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:fpra; PDBTitle: a covalent modification of nadp+ revealed by the atomic resolution2 structure of fpra, a mycobacterium tuberculosis oxidoreductase Resolution 1.05 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		K	I	V	I	V	G	G	G	A	G	G	L	E	M	A	T	Q	L	G	H	K	L	G	R	K	K	.	.	K	A	K	I	T	L	V	D	R	N	H	S	H	L	W	K	P	L	L	H	E	V	A	T	G	S	L	D	E	G	V	D	A	L	S	Y	L	A	H	A	R	N	H	G	F	Q	F	Q	L	G	S	V
Query Conservation																												.	.
Alig confidence																												.	.																.
Template Conservation																																													.
Template Sequence		Y	I	A	I	V	G	S	G	P	S	A	F	F	A	A	A	S	L	L	K	A	A	D	T	T	E	D	L	D	M	A	V	D	M	L	E	M	L	P	T	P	W	G	.	L	V	R	S	G	V	A	P	D	H	P	K	I	K	S	I	S	K	Q	F	E	K	T	A	E	D	P	R	F	R	F	F	G	N	V	V
Template Known Secondary structure									S																	S	T	T										S	S	S	S		S	T	.					T	S		T	T		T	T	G	G	G	G									T	S	T	T						S
Template Predicted Secondary structure																																													.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		I	D	I	D	R	E	A	K	T	I	T	I	A	E	L	R	D	E	K	G	E	L	L	V	P	E	R	K	I	A	Y	D	T	L	V	M	A	L	G	S	.	T	S	N	D	F	N	T	P	G	V	K	E	N	C	I	F	L	D	N	P	H	Q	A	R	R	F	H	Q	E	M	L	N	L	F	L	K	Y	S	A
Query Conservation																																										.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																		.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Sequence		V	G	E	H	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	G	E	L	S	E	R	Y	D	A	V	I	Y	A	V	G	A	Q	S	D	R	M	L	N	I	P	G	E	D	L	P	G	S	I	A	.	.	.	.	.	.	A	V	D	F	V	G	W	Y	N	A	H	P	H	F	E	Q
Template Known Secondary structure		B	T	T	T	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S																	T	T	T	T	S	T	T				.	.	.	.	.	.									T	T		G	G	G	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.																		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.																																				.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	G	A	N	G	K	V	N	I	A	I	V	G	G	G	A	T	G	V	E	L	S	A	E	L	H	N	A	V	K	Q	L	H	S	Y	G	Y	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	N	E	A
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	P	D	L	S	G	A	R	A	V	V	I	G	N	G	N	V	A	L	D	V	A	R	I	L	L	T	D	P	D	V	L	A	R	T	D	I	A	D	H	A	L	E	S	L	R	P	R	G	I	Q	E	V	V	I	V	G	R	R	G	P	L	Q	A	A	F	T	T	L	E	L	R	E	L	A	D	L	D	G
Template Known Secondary structure								S	S							S	S												S						T	T	S											T	T											S	S		G	G	G										G	G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.															240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	V	T	L	V	E	A	G	E	R	I	L	P	A	L	P	P	R	I	S	A	A	A	H	N	E	L	T	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	R	V	L	T	Q	T	M	V	T	S	A	D	E	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	V	V	I	D	P	A	E	L	D	G	I	T	D	E	D	A	A	A	V	G	K	V	C	K	Q	N	I	K	V	L	R	G	Y	A	D	R	E	P	R	P	G	H	R	R	M	V	F	R	F	L	T	S	P	I	E	I	K	G	K	R	K	V	E	R	I	V	L	G	R	N	E	L	V	S	D	G	S	G
Template Known Secondary structure								G	G	G	G	T	T																									T	S				T	T	S								S									S	S	S															S	S	S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
						257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	L	H	T	K	D	G	E	Y	I	E	A	D	L	M	V	W	A	A	G	I	K	A	P	D	F	L	K	D	I	G	G	L	E	T	N	R	I	N	Q	L	V	V	E	P	T	L	Q	T	T	R	D	P	D	I	Y	A	I	G	D	C	A	S	C	P	R	P	E	G	G	F	V	P	P	R	A	Q
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																									.	.	.	.																																							.	.	.	.	.	.	.
Template Conservation																														.	.	.	.																																							.	.	.	.	.	.	.
Template Sequence		R	V	A	A	K	D	T	G	E	R	E	E	L	P	A	Q	L	V	V	R	S	V	G	Y	R	G	V	P	.	.	.	.	T	P	G	L	P	F	D	D	Q	S	G	T	I	P	N	V	G	G	R	I	N	G	S	P	N	E	Y	V	V	G	W	I	K	R	G	P	T	G	.	.	.	.	.	.	.	V	I	G
Template Known Secondary structure		S															S						S							.	.	.	.		T	T	S			B	T	T	T	T	B					T	T			T	T		S	S					T						S		S	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																														.	.	.	.																																							.	.	.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.								.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	H	Q	M	A	T	C	A	M	N	N	I	L	A	Q	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	K	K	D	A	Q	D	T	V	D	T	L	I	K	N	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions