Job Description P55138 Confidence 83.32% Date Thu Jan 5 12:06:08 GMT 2012 Rank 143 Aligned Residues 64 % Identity 17% Template c3psfA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(236-1259) Resolution 2.59 Å

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		6	.	.	.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		I	I	G	I	D	G	G	.	.	.	.	.	S	Q	S	T	K	V	V	M	Y	D	L	E	G	N	V	V	C	E	G	K	G	L	L	Q	P	M	H	T	P	D	A	D	T	A	E	H	P	D	D	D	L	W	A	S	L	C	F	A	G	H	D	L	M	S	Q	F	A	G	N	K	E	D	I	V	G	I	G	L
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Sequence		I	L	S	L	T	C	G	Q	G	R	F	G	A	D	A	I	I	A	V	Y	V	N	R	K	G	D	F	I	R	D	Y	K	I	V	D	N	P	F	D	K	T	N	P	.	.	.	.	.	.	.	.	.	.	.	E	K	F	E	D	T	L	D	N	I	I	Q	S	C	Q	.	.	.	P	N	A	I	G	I	N	G
Template Known Secondary structure								T	T			T	T	T	S									T	T	S										S		T	T		S	S			.	.	.	.	.	.	.	.	.	.	.																.	.	.		S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template SS confidence
		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.												.	.	.	.	.	.	.	800	.	.	.	.	.	.	.				.	.	810	.	.	.	.	.
		81	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	N	P
Template Known Secondary structure		S	S	T
Template Predicted Secondary structure
Template SS confidence
		816	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions