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Job DescriptionP55138
Confidence100.00%DateThu Jan 5 12:06:08 GMT 2012
Rank5Aligned Residues446
% Identity21%Templatec3flcX_
PDB info PDB header:transferaseChain: X: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of the his-tagged h232r mutant of glycerol kinase2 from enterococcus casseliflavus with glycerol
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLG
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Template Sequence  EKNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEF. PQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGIT
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   3......10.........20.........30...... ...40.........50.........60.........70.........80.
 
   82.......90.. .......100.........110 .........120.
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Query Sequence  SIRCCRALLKA. DGTPAAPLISWQDARVTR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PYEHTNPDVAY. . . . . . .
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Template Sequence  NQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADNGEL
Template Known Secondary structure 
SS
TTT

BSS

TT

TTTT
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TTSSTTTT
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   122.......130...... ...140.........150.........160.........170.........180.........190........
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Query Sequence  . VTSFSGYLTHRLTGE. . FKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFP
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Template Sequence  LFGTIDSWLVWKLTDGQVHVTDYSNASRTMLYNIHKLEWDQE. . ILDLLNIPSSMLPEVKSNSEVYGHTRSY. . . . RFYG
Template Known Secondary structure  TTTS

TTTSTTTT
..TT

GGG


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   162.......170.........180.........190.........200... ......210.........220.........230. ....
 
   199200.........210.........220.........230.........240.........250......... 260.........270......
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Query Sequence  AGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQT. . LLYEGYGIRKGMWTVSW
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Template Sequence  SEVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPLSDNDLLTTIGYGINGKVYYALEGSIFVAGSAIQW
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TT

STT
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   236...240.........250.........260.........270.........280.........290.........300.........310.....
 
   277..280.........290.........300.........310........ .320.........330.........340.........350...
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Query Sequence  LRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVL. . . DWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESV
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Template Sequence  LRDGLRMIETSP. . . . . . . . . . . QSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFVRATLQAV
Template Known Secondary structure  TS

SSSTT...........

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   317..320........ .330.........340.........350.........360.........370.........380.....
 
   354.....360.........370.........380.........390.........400.........410.........420.........430...
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Query Sequence  ALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNM
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Template Sequence  AYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDEL. KSM
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SGGGG
TSSSS
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.T
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   386...390.........400.........410.........420.........430.........440.........450.........460. ...
 
   434.....440.........450.........460........
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Query Sequence  VRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVI
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Template Sequence  AEEGQMFTPEMPAEE. RDNLYE. GWKQAVAATQTF
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   465....470......... 480..... ....490.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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